Entry information : BamCP01_AMMD
Entry ID 2304
Creation 2006-07-04 (Nenad Bakalovic)
Last sequence changes 2006-07-04 (Nenad Bakalovic)
Sequence status complete
Reviewer reviewer name not stored
Last annotation changes 2010-03-26 (Christophe Dunand)
Peroxidase information: BamCP01_AMMD
Name BamCP01_AMMD
Class Catalase peroxidase    [Orthogroup: CP001]
Taxonomy Bacteria Proteobacteria Betaproteobacteria Burkholderiaceae Burkholderia
Organism Burkholderia ambifaria    [TaxId: 152480 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BamCP01_AMMD
start..stop
S start..stop
BamCP01_MC40 1466 0 1..728 1..728
BcenCP01_HI2424 1368 0 1..728 9..736
BcenCP01_AU1054 1366 0 1..728 1..728
BdCP01 1355 0 1..728 1..728
Literature and cross-references BamCP01_AMMD
Literature Copeland,A. et al., Complete sequence of chromosome 1 of Burkholderia cepacia AMMD, unpublished
Protein ref. UniProtKB:   Q0BI48
DNA ref. GenBank:   CP000440.1 (690886..693072)
Protein sequence: BamCP01_AMMD
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   728
PWM (Da):   %s   79012.68  
PI (pH):   %s   5.65
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MSTEAKCPFN HTAAGGTSNK DWWPNQLNLN ILHRHSALSD PMDKDFDYAQ AFKKLDLAAV KRDLQALMTT SQDWWPADFG HYGGLFVRMA WHSAGTYRIA DGRGGAGGGQ QRFAPLNSWP  DNANLDKARR LLWPIKQKYG RNISWADLLI LTGNVALESM GFKTFGYAGG RADTWEPDDV YWGSEKIWLE LSGGPNSRYS GDRDLENPLA AVQMGLIYVN PEGPDGNPDP VAAARDIRDT  FARMAMNDEE TVALIAGGHT FGKTHGAGPA TDVGPEPEAA GIELQGLGWK SAYASGKGHD AITSGLEVTW TSTPTKWSHD FFKHLFSYEW ELTKSPAGAH QWVAKGADEV IPDAFDASKK  HRPTMLTTDL SLRFDPAYEK ISRRFYENPA EFADAFARAW FKLTHRDMGP RARYLGPEVP AEELLWQDPI PAVDHPLIDD ADVAALKAKV LASGLSVAQL VSTAWASAST FRGSDKRGGA  NGARIRLAPQ KDWEVNQPAA LAAVLETLEG VRKAFNDAQT GGKKVSLADL IVLAGAAGVE QAAKSAGVAV TVPFAPGRMD ASQEQTDVDA MAVLEPVADG FRNYLKSAYK TPAEALLVDK  AQLLTLNGPE LTVLVGGLRV LGANVGDAKH GVFTDRPGTL SNDFFVNLLD MGTEWKPVSA ANDVFEGRDR ATGQVKWTGT RVDLIFGSHS QLRALAEVYG SADANEKFVR DFVAAWNKVM 
NLDRFDLA 

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 1). Strain="ATCC BAA-244 / AMMD" (Burkholderia cepacia (strain AMMD).