Entry information : BviCP01_G4
Entry ID 2316
Creation 2006-07-04 (Nenad Bakalovic)
Last sequence changes 2015-12-20 (Achraf Jemmat)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2015-12-20 (Christophe Dunand)
Peroxidase information: BviCP01_G4
Name BviCP01_G4
Class Catalase peroxidase    [Orthogroup: CP001]
Taxonomy Bacteria Proteobacteria Betaproteobacteria Burkholderiaceae Burkholderia
Organism Burkholderia vietnamiensis    [TaxId: 60552 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BviCP01_G4
start..stop
S start..stop
BamCP01_AMMD 1366 0 1..728 1..728
BamCP01_MC40 1359 0 1..728 1..728
BdCP01 1344 0 1..728 1..728
BcenCP01_HI2424 1337 0 1..728 9..736
Literature and cross-references BviCP01_G4
Literature Copeland,A. et al., Sequencing of the draft genome and assembly of Burkholderia vietnamiensis G4, unpublished.
DNA sequence http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=67531074&dopt=GenPept
Other sequence link http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?val=67531030&itemID=44&view=gbwithparts
Protein ref. GenBank:   EAM27898.1 UniProtKB:   Q4BDE4
DNA ref. GenBank:   AAEH02000037.1
Protein sequence: BviCP01_G4
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   728
PWM (Da):   %s   78922.36  
PI (pH):   %s   5.41
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MSTESKCPFN HTAAGGTSNH DWWPNRLNLE VLHRHSALSD PMDAEFDYAQ AFKQLDLAAV KRDLHALMTM SQDWWPADFG HYGGLFVRMA WHGAGTYRIA DGRGGAGGGQ QRFAPLNSWP  DNGNLDKARR LLWPIKQKYG RNISWADLFI LTGNVALESM GFKTFGYGGG RADTWEPDDV YWGSEKIWLE LSGGPNSRYS GDRDLENPLA AVQMGLIYVN PEGPDGKPDP VAAARDIRDT  FARMAMNDEE TVALIAGGHT FGKTHGAGPA SHVGAEPEAA GIEQQGLGWK STYGSGKAGD AITSGLEVTW TSTPTQWSND FFKHLFSYEW ELTKSPAGAH QWVAKDAEAV IPDAFDPSKK  HRPTMLTTDL SLRFDPAYEK ISRRFYENPD EFADAFARAW FKLTHRDMGP RSRYLGPEVP AEELLWQDPI PAVDHPLIDD ADAAALKAKI LATGLTVAQL VSTAWASAST FRGSDKRGGA  NGARIRLAPQ KDWAVNQPAA LAAVLETLEG VQKAFNDAQT GGKKVSLADL IVLAGAAGVE QAAKQAGVAV TVPFAAGRMD ASQEQTDVDA MAVLEPVADG FRNYLKAAYK TPAEALLVDK  AQLLTLTAPE MTVLIGGLRV LGANAGGAQH GVFTDRPGTL SNDFFVNLLD MGTEWKPASA ANDVFEGRDR ASGQLKWTGT RVDLIFGSHS QLRALAEVYG SADANEKFVR DFVAAWNKVM 
NLDRFDLA 

Retrieve as FASTA  
Remarks Whole genome shotgun sequence. Strain G4.
DNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGTCGACCG AATCGAAATG TCCGTTCAAC CACACGGCGG CCGGCGGCAC GTCGAACCAT GACTGGTGGC CGAACCGGCT GAACCTCGAG GTCCTGCACC GGCATTCGGC GCTGTCCGAT  CCGATGGACG CCGAGTTCGA CTACGCGCAG GCGTTCAAGC AGCTCGACCT CGCAGCGGTG AAGCGCGACC TGCATGCGCT GATGACGATG TCGCAGGACT GGTGGCCGGC CGACTTCGGT  CACTACGGCG GCCTGTTCGT GCGGATGGCC TGGCATGGCG CGGGCACGTA CCGGATCGCC GACGGGCGCG GCGGCGCGGG CGGCGGGCAG CAGCGCTTCG CGCCGCTGAA CAGCTGGCCC  GACAACGGCA ACCTCGACAA GGCGCGCCGC CTGCTGTGGC CGATCAAGCA GAAGTACGGC CGCAACATCT CGTGGGCCGA CCTGTTCATC CTGACCGGCA ACGTCGCGCT CGAATCGATG  GGCTTCAAGA CCTTCGGTTA CGGCGGCGGC CGTGCCGACA CGTGGGAGCC GGACGACGTC TACTGGGGTT CGGAAAAGAT CTGGCTGGAA CTGAGCGGCG GCCCGAACAG CCGTTACTCG  GGCGACCGCG ATCTCGAGAA TCCGCTCGCG GCCGTGCAGA TGGGCCTCAT CTACGTGAAC CCGGAAGGCC CGGACGGCAA GCCCGATCCG GTGGCGGCCG CGCGCGACAT CCGCGACACG  TTCGCCCGCA TGGCGATGAA CGACGAAGAG ACGGTCGCGC TGATCGCCGG CGGCCACACG TTCGGCAAGA CGCACGGCGC GGGCCCGGCA TCGCACGTCG GCGCCGAGCC GGAAGCGGCG  GGCATCGAGC AGCAGGGCCT CGGCTGGAAG AGCACTTACG GCTCGGGCAA GGCCGGCGAC GCGATCACGA GCGGCCTCGA AGTCACGTGG ACGTCGACGC CGACCCAATG GAGCAACGAC  TTCTTCAAGC ACCTGTTCAG CTATGAATGG GAGCTGACCA AGAGCCCGGC CGGCGCGCAC CAGTGGGTCG CGAAGGATGC CGAGGCGGTG ATTCCCGATG CCTTCGATCC GTCGAAGAAG  CATCGCCCGA CGATGCTGAC GACCGACCTG TCGCTGCGCT TCGATCCGGC CTACGAAAAG ATCTCGCGCC GCTTCTACGA GAACCCGGAC GAGTTCGCCG ACGCGTTTGC GCGTGCGTGG  TTCAAGCTCA CGCACCGCGA CATGGGCCCG CGCTCGCGCT ATCTCGGCCC GGAAGTGCCG GCCGAGGAAC TGCTGTGGCA GGACCCGATT CCCGCCGTCG ACCACCCGCT GATCGATGAC  GCCGATGCGG CCGCGCTGAA GGCGAAGATC CTCGCGACCG GGCTCACCGT GGCGCAACTC GTGTCGACCG CATGGGCGTC GGCATCGACG TTCCGCGGCT CGGACAAGCG CGGCGGCGCG  AACGGCGCAC GCATCCGCCT CGCCCCGCAG AAGGACTGGG CGGTGAACCA GCCGGCGGCG CTCGCGGCGG TCCTCGAGAC GCTCGAAGGC GTGCAGAAGG CGTTCAACGA CGCGCAGACG  GGCGGCAAGA AGGTGTCGCT CGCCGACCTG ATCGTGCTGG CCGGTGCGGC CGGCGTCGAA CAGGCCGCCA AGCAGGCAGG CGTCGCGGTC ACGGTGCCGT TCGCCGCGGG CCGGATGGAC  GCGTCGCAGG AGCAGACGGA CGTCGACGCG ATGGCCGTGC TCGAGCCGGT CGCCGACGGT TTCCGCAACT ACCTGAAGGC CGCGTACAAG ACGCCGGCCG AGGCGCTGCT GGTCGACAAG  GCGCAGCTGC TGACGCTGAC GGCGCCGGAG ATGACCGTGC TGATCGGCGG CCTGCGCGTG CTGGGCGCGA ACGCGGGCGG CGCGCAGCAC GGCGTGTTCA CCGATCGTCC GGGCACGCTG  TCGAACGACT TCTTCGTGAA CCTGCTCGAC ATGGGCACGG AGTGGAAGCC GGCGTCGGCG GCGAACGACG TGTTCGAAGG GCGCGACCGT GCGAGCGGGC AGCTGAAATG GACCGGCACG  CGCGTCGACC TGATCTTCGG CTCGCACTCG CAGCTGCGCG CGCTGGCCGA GGTGTACGGC AGCGCCGACG CGAACGAGAA GTTCGTGCGT GATTTCGTCG CGGCCTGGAA CAAGGTGATG 
AACCTCGACC GCTTCGACCT CGCA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGTCGACCG AATCGAAATG TCCGTTCAAC CACACGGCGG CCGGCGGCAC GTCGAACCAT GACTGGTGGC CGAACCGGCT GAACCTCGAG GTCCTGCACC GGCATTCGGC GCTGTCCGAT  CCGATGGACG CCGAGTTCGA CTACGCGCAG GCGTTCAAGC AGCTCGACCT CGCAGCGGTG AAGCGCGACC TGCATGCGCT GATGACGATG TCGCAGGACT GGTGGCCGGC CGACTTCGGT  CACTACGGCG GCCTGTTCGT GCGGATGGCC TGGCATGGCG CGGGCACGTA CCGGATCGCC GACGGGCGCG GCGGCGCGGG CGGCGGGCAG CAGCGCTTCG CGCCGCTGAA CAGCTGGCCC  GACAACGGCA ACCTCGACAA GGCGCGCCGC CTGCTGTGGC CGATCAAGCA GAAGTACGGC CGCAACATCT CGTGGGCCGA CCTGTTCATC CTGACCGGCA ACGTCGCGCT CGAATCGATG  GGCTTCAAGA CCTTCGGTTA CGGCGGCGGC CGTGCCGACA CGTGGGAGCC GGACGACGTC TACTGGGGTT CGGAAAAGAT CTGGCTGGAA CTGAGCGGCG GCCCGAACAG CCGTTACTCG  GGCGACCGCG ATCTCGAGAA TCCGCTCGCG GCCGTGCAGA TGGGCCTCAT CTACGTGAAC CCGGAAGGCC CGGACGGCAA GCCCGATCCG GTGGCGGCCG CGCGCGACAT CCGCGACACG  TTCGCCCGCA TGGCGATGAA CGACGAAGAG ACGGTCGCGC TGATCGCCGG CGGCCACACG TTCGGCAAGA CGCACGGCGC GGGCCCGGCA TCGCACGTCG GCGCCGAGCC GGAAGCGGCG  GGCATCGAGC AGCAGGGCCT CGGCTGGAAG AGCACTTACG GCTCGGGCAA GGCCGGCGAC GCGATCACGA GCGGCCTCGA AGTCACGTGG ACGTCGACGC CGACCCAATG GAGCAACGAC  TTCTTCAAGC ACCTGTTCAG CTATGAATGG GAGCTGACCA AGAGCCCGGC CGGCGCGCAC CAGTGGGTCG CGAAGGATGC CGAGGCGGTG ATTCCCGATG CCTTCGATCC GTCGAAGAAG  CATCGCCCGA CGATGCTGAC GACCGACCTG TCGCTGCGCT TCGATCCGGC CTACGAAAAG ATCTCGCGCC GCTTCTACGA GAACCCGGAC GAGTTCGCCG ACGCGTTTGC GCGTGCGTGG  TTCAAGCTCA CGCACCGCGA CATGGGCCCG CGCTCGCGCT ATCTCGGCCC GGAAGTGCCG GCCGAGGAAC TGCTGTGGCA GGACCCGATT CCCGCCGTCG ACCACCCGCT GATCGATGAC  GCCGATGCGG CCGCGCTGAA GGCGAAGATC CTCGCGACCG GGCTCACCGT GGCGCAACTC GTGTCGACCG CATGGGCGTC GGCATCGACG TTCCGCGGCT CGGACAAGCG CGGCGGCGCG  AACGGCGCAC GCATCCGCCT CGCCCCGCAG AAGGACTGGG CGGTGAACCA GCCGGCGGCG CTCGCGGCGG TCCTCGAGAC GCTCGAAGGC GTGCAGAAGG CGTTCAACGA CGCGCAGACG  GGCGGCAAGA AGGTGTCGCT CGCCGACCTG ATCGTGCTGG CCGGTGCGGC CGGCGTCGAA CAGGCCGCCA AGCAGGCAGG CGTCGCGGTC ACGGTGCCGT TCGCCGCGGG CCGGATGGAC  GCGTCGCAGG AGCAGACGGA CGTCGACGCG ATGGCCGTGC TCGAGCCGGT CGCCGACGGT TTCCGCAACT ACCTGAAGGC CGCGTACAAG ACGCCGGCCG AGGCGCTGCT GGTCGACAAG  GCGCAGCTGC TGACGCTGAC GGCGCCGGAG ATGACCGTGC TGATCGGCGG CCTGCGCGTG CTGGGCGCGA ACGCGGGCGG CGCGCAGCAC GGCGTGTTCA CCGATCGTCC GGGCACGCTG  TCGAACGACT TCTTCGTGAA CCTGCTCGAC ATGGGCACGG AGTGGAAGCC GGCGTCGGCG GCGAACGACG TGTTCGAAGG GCGCGACCGT GCGAGCGGGC AGCTGAAATG GACCGGCACG  CGCGTCGACC TGATCTTCGG CTCGCACTCG CAGCTGCGCG CGCTGGCCGA GGTGTACGGC AGCGCCGACG CGAACGAGAA GTTCGTGCGT GATTTCGTCG CGGCCTGGAA CAAGGTGATG 
AACCTCGACC GCTTCGACCT CGCA 

Retrieve as FASTA