Entry information : LmAPx-CcP (APx)
Entry ID 2334
Creation 2006-12-21 (Christophe Dunand)
Last sequence changes 2012-05-24 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-05-24 (Christophe Dunand)
Peroxidase information: LmAPx-CcP (APx)
Name (synonym) LmAPx-CcP (APx)
Class Hybrid Ascorbate-Cytochrome C peroxidase    [Orthogroup: APx-CcP001]
Taxonomy Eukaryota Trypanosomatidae Leishmania
Organism Leishmania major    [TaxId: 5664 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LmAPx-CcP
start..stop
S start..stop
LinfAPx-CcP 610 0 1..303 1..303
LdonAPx-CcP01 610 0 1..303 1..303
LmexAPx-CcP01 577 0 1..303 1..303
LbraAPx-CcP 541 0 1..302 1..304
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 22865..23776 912  
join(22865..23776)


exon

Literature and cross-references LmAPx-CcP (APx)
Literature Peacock C.S., Murphy L., Ivens A.C., Berriman M., Blackwell J., Smith D., Collins M., Fosker N., Harris D., Oliver K., O'Neil S., Saunders D., Seeger K., Warren T., Rajandream M., and Barrell B.G.;
Submitted (JUN-2005)
Protein ref. UniProtKB:   Q4Q3K2
DNA ref. GenBank:   FR796430.1 (22865..23776)
Protein sequence: LmAPx-CcP (APx)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   303
PWM (Da):   %s   33763.76 Transmb domain:   %s   i12-34o
PI (pH):   %s   7.13
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MSGTSRRAKG LFTGIAVGTF VSGAMFVSCA SARVEEPPFD IRALRADIED MISEKLELGP SLIRLAWHEA ASYDCFKKDG SPNSASMRFK PECLYAGNKG LDIPRKALET LKKKYPQISY  ADLWVLAAYV AIEYMGGPTI PFCWGRVDAK DGSVCGPDGR LPDGSKTQSH VREVFRRLGF NDQETVALIG AHTCGECHIE FSGYHGPWTH DKNGFDNSFF TQLLDEDWVL NPKVEQMQLM 
DRATTKLMML PSDVCLLLDP SYRKYVELYA KDNDRFNKDF ANAFKKLTEL GTRNLHKAPA SES 

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 34, no intron). Annotated as Ascorbate peroxidase (unspecific ascorbate peroxidase activity!!!), but the sequence contains CcP motifs.
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTCCGGCA CCTCGCGGCG AGCGAAAGGC CTCTTTACCG GCATCGCTGT CGGCACCTTC GTGAGTGGTG CCATGTTTGT TTCCTGCGCC AGTGCACGCG TGGAGGAGCC GCCGTTCGAC  ATCAGGGCTC TCCGCGCCGA CATTGAGGAC ATGATCTCTG AAAAGCTGGA ACTCGGACCT TCGCTGATTC GCCTCGCATG GCACGAGGCC GCCTCGTACG ACTGCTTCAA GAAGGACGGC  TCTCCGAACT CAGCGTCGAT GCGCTTCAAA CCGGAATGCC TGTATGCGGG TAACAAAGGT CTCGATATCC CTCGCAAAGC GCTGGAGACG TTGAAGAAGA AGTACCCTCA AATATCTTAC  GCTGATTTGT GGGTGCTCGC CGCCTACGTG GCCATCGAGT ACATGGGTGG TCCCACGATT CCGTTCTGCT GGGGTCGTGT GGATGCCAAG GACGGCTCTG TGTGTGGACC TGACGGGCGC  CTGCCGGACG GCTCAAAGAC GCAAAGTCAC GTGCGCGAGG TGTTCAGGCG TCTCGGGTTC AATGACCAGG AGACAGTGGC GCTCATCGGT GCGCACACAT GCGGTGAGTG CCACATCGAA  TTCTCCGGCT ACCATGGGCC GTGGACACAC GACAAGAACG GTTTTGACAA CTCTTTCTTT ACGCAGCTGC TCGATGAAGA TTGGGTCTTG AATCCCAAGG TCGAGCAGAT GCAGCTGATG  GACCGCGCGA CGACAAAGCT GATGATGCTT CCCAGTGACG TTTGCCTCCT CCTCGATCCC AGCTACCGCA AGTACGTGGA GCTGTACGCA AAGGACAACG ACCGCTTCAA CAAAGACTTT 
GCGAATGCGT TCAAAAAGCT GACCGAGCTC GGCACCAGGA ACCTTCACAA AGCACCCGCT TCGGAGAGCT AA 

Retrieve as FASTA  
CDS
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTCCGGCA CCTCGCGGCG AGCGAAAGGC CTCTTTACCG GCATCGCTGT CGGCACCTTC GTGAGTGGTG CCATGTTTGT TTCCTGCGCC AGTGCACGCG TGGAGGAGCC GCCGTTCGAC  ATCAGGGCTC TCCGCGCCGA CATTGAGGAC ATGATCTCTG AAAAGCTGGA ACTCGGACCT TCGCTGATTC GCCTCGCATG GCACGAGGCC GCCTCGTACG ACTGCTTCAA GAAGGACGGC  TCTCCGAACT CAGCGTCGAT GCGCTTCAAA CCGGAATGCC TGTATGCGGG TAACAAAGGT CTCGATATCC CTCGCAAAGC GCTGGAGACG TTGAAGAAGA AGTACCCTCA AATATCTTAC  GCTGATTTGT GGGTGCTCGC CGCCTACGTG GCCATCGAGT ACATGGGTGG TCCCACGATT CCGTTCTGCT GGGGTCGTGT GGATGCCAAG GACGGCTCTG TGTGTGGACC TGACGGGCGC  CTGCCGGACG GCTCAAAGAC GCAAAGTCAC GTGCGCGAGG TGTTCAGGCG TCTCGGGTTC AATGACCAGG AGACAGTGGC GCTCATCGGT GCGCACACAT GCGGTGAGTG CCACATCGAA  TTCTCCGGCT ACCATGGGCC GTGGACACAC GACAAGAACG GTTTTGACAA CTCTTTCTTT ACGCAGCTGC TCGATGAAGA TTGGGTCTTG AATCCCAAGG TCGAGCAGAT GCAGCTGATG  GACCGCGCGA CGACAAAGCT GATGATGCTT CCCAGTGACG TTTGCCTCCT CCTCGATCCC AGCTACCGCA AGTACGTGGA GCTGTACGCA AAGGACAACG ACCGCTTCAA CAAAGACTTT 
GCGAATGCGT TCAAAAAGCT GACCGAGCTC GGCACCAGGA ACCTTCACAA AGCACCCGCT TCGGAGAGCT AA 

Retrieve as FASTA