Entry information : TcrCcP
Entry ID 2360
Creation 2006-07-05 (Nenad Bakalovic)
Last sequence changes 2012-05-24 (Christophe Dunand)
Sequence status theoretical translation / pseudogene
Reviewer Not yet reviewed
Last annotation changes 2012-05-24 (Christophe Dunand)
Peroxidase information: TcrCcP
Name TcrCcP
Class Cytochrome C peroxidase     [Orthogroup: CcP005]*
Taxonomy Eukaryota Trypanosomatidae Trypanosoma
Organism Trypanosoma cruzi    [TaxId: 5693 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value TcrCcP
start..stop
S start..stop
TbrCcP 433 3e-152 4..376 5..373
LinfCcP 392 1e-136 37..375 2..339
LmCcP 388 4e-135 37..375 2..339
LbraCcP 386 2e-133 32..375 45..387
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 158514..159659 1146  
complement(join(158514..159659))


exon

Literature and cross-references TcrCcP
Literature El-Sayed,N.M.A. et al,
The Genome Sequence of Trypanosoma cruzi, Etiologic Agent of Chagas Disease Science 309 (5733), 409-415 (2005)
Protein ref. GenPept:   EAN82731 UniProtKB:   Q4CR30
DNA ref. GenBank:   NW_001849518.1 (159659..158514)
Protein sequence: TcrCcP
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   381 (360)
PWM (Da):   %s   42193.29 (39727.1)  
PI (pH):   %s   8.22 (7.81) Peptide Signal:   %s   cut: 30 range:22-381
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MWRSLRKPYV LFSCCTSFCA SASTSSAHAG ETKGNRFRSP ASAGSSTGGS QQREANPYKS WEHLNHKWLL MMCIGCLAGG LAAGQVVDVD DNTLRPPFLK ESVLADIAKT FEFRPDLAAT  SIRVAFILAA RRAGFATDNI DESCAVVSGL EDIAGVLRHL STVHGLSTED AASLLAVAAV KFLKGPCDVI ESNWRWGRND TDTTLPRKNQ LAEADSGLIA LPTILEGLGG LTDEESVALM  ACHGVGEFHE HVSGIDGVSH IGSQYKLSND YYKFLLANER RFFELEVPRT EENKVIQRLP KDFVCVYAHV GKKQKKRQCV FNRREVEALL RNKKWRNLTE RYATDEAAWA AAFQSAFTKM 
IECHFKRLRP YNKPSEQMHT E 

Retrieve as FASTA  
Remarks Complete sequence from genomic (no intron) and cDNA: AI046212, XM_807623 and XM_799489. Putative CcP, distal histidine is lacking. Strain="CL Brener".
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTGGAGAT CTCTGCGCAA GCCGTACGTT TTGTTTAGCT GCTGCACTTC TTTCTGCGCG TCAGCATCAA CATCGTCGGC ACATGCAGGA GAAACGAAGG GAAATCGCTT TAGATCCCCG  GCGAGCGCTG GCAGCAGCAC GGGGGGTTCA CAGCAGCGAG AGGCAAATCC ATACAAGTCA TGGGAGCACT TGAATCATAA GTGGCTTCTT ATGATGTGCA TCGGCTGTCT TGCGGGGGGG  CTTGCCGCCG GCCAGGTTGT GGACGTGGAC GATAATACAC TGCGCCCGCC TTTTTTGAAA GAATCTGTGC TTGCAGACAT TGCCAAAACG TTTGAGTTTC GTCCTGATTT GGCGGCCACA  AGCATCCGCG TTGCCTTCAT CCTTGCCGCC CGCCGCGCGG GGTTTGCTAC AGACAACATT GATGAGTCTT GCGCTGTTGT CAGTGGCCTA GAGGACATTG CCGGCGTGCT GCGCCATCTT  TCAACTGTGC ACGGTCTTTC GACGGAAGAC GCCGCGTCTC TTTTGGCGGT GGCTGCCGTA AAGTTTTTAA AGGGGCCCTG TGACGTCATT GAAAGCAACT GGCGGTGGGG GCGAAATGAC  ACGGACACCA CACTCCCGCG GAAGAACCAA CTTGCCGAGG CTGACTCCGG CCTTATTGCG CTGCCGACCA TTCTTGAGGG GCTCGGTGGC CTCACAGATG AGGAGAGCGT TGCCCTCATG  GCGTGCCACG GCGTCGGGGA ATTTCACGAG CACGTAAGCG GCATCGACGG CGTGTCACAC ATTGGTAGCC AGTACAAACT CAGCAACGAC TATTACAAAT TTCTGTTGGC GAATGAAAGG  CGATTCTTTG AGCTGGAAGT GCCTCGGACA GAGGAAAACA AGGTCATTCA GCGCCTCCCA AAGGACTTCG TCTGTGTTTA TGCACATGTG GGAAAGAAAC AAAAAAAGCG GCAATGTGTC  TTTAACCGAC GCGAGGTGGA AGCCCTGCTA CGCAATAAAA AATGGCGAAA TTTAACAGAA CGATACGCGA CAGATGAAGC GGCGTGGGCG GCGGCGTTTC AGTCGGCTTT TACGAAAATG 
ATAGAATGTC ATTTTAAGCG CCTCCGACCG TACAACAAGC CTTCCGAGCA AATGCATACG GAATGA 

Retrieve as FASTA  
CDS
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTGGAGAT CTCTGCGCAA GCCGTACGTT TTGTTTAGCT GCTGCACTTC TTTCTGCGCG TCAGCATCAA CATCGTCGGC ACATGCAGGA GAAACGAAGG GAAATCGCTT TAGATCCCCG  GCGAGCGCTG GCAGCAGCAC GGGGGGTTCA CAGCAGCGAG AGGCAAATCC ATACAAGTCA TGGGAGCACT TGAATCATAA GTGGCTTCTT ATGATGTGCA TCGGCTGTCT TGCGGGGGGG  CTTGCCGCCG GCCAGGTTGT GGACGTGGAC GATAATACAC TGCGCCCGCC TTTTTTGAAA GAATCTGTGC TTGCAGACAT TGCCAAAACG TTTGAGTTTC GTCCTGATTT GGCGGCCACA  AGCATCCGCG TTGCCTTCAT CCTTGCCGCC CGCCGCGCGG GGTTTGCTAC AGACAACATT GATGAGTCTT GCGCTGTTGT CAGTGGCCTA GAGGACATTG CCGGCGTGCT GCGCCATCTT  TCAACTGTGC ACGGTCTTTC GACGGAAGAC GCCGCGTCTC TTTTGGCGGT GGCTGCCGTA AAGTTTTTAA AGGGGCCCTG TGACGTCATT GAAAGCAACT GGCGGTGGGG GCGAAATGAC  ACGGACACCA CACTCCCGCG GAAGAACCAA CTTGCCGAGG CTGACTCCGG CCTTATTGCG CTGCCGACCA TTCTTGAGGG GCTCGGTGGC CTCACAGATG AGGAGAGCGT TGCCCTCATG  GCGTGCCACG GCGTCGGGGA ATTTCACGAG CACGTAAGCG GCATCGACGG CGTGTCACAC ATTGGTAGCC AGTACAAACT CAGCAACGAC TATTACAAAT TTCTGTTGGC GAATGAAAGG  CGATTCTTTG AGCTGGAAGT GCCTCGGACA GAGGAAAACA AGGTCATTCA GCGCCTCCCA AAGGACTTCG TCTGTGTTTA TGCACATGTG GGAAAGAAAC AAAAAAAGCG GCAATGTGTC  TTTAACCGAC GCGAGGTGGA AGCCCTGCTA CGCAATAAAA AATGGCGAAA TTTAACAGAA CGATACGCGA CAGATGAAGC GGCGTGGGCG GCGGCGTTTC AGTCGGCTTT TACGAAAATG 
ATAGAATGTC ATTTTAAGCG CCTCCGACCG TACAACAAGC CTTCCGAGCA AATGCATACG GAATGA 

Retrieve as FASTA