Entry information : LmCcP
Entry ID 2452
Creation 2006-07-05 (Christophe Dunand)
Last sequence changes 2012-06-20 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-06-20 (Christophe Dunand)
Peroxidase information: LmCcP
Name LmCcP
Class Cytochrome C peroxidase    [Orthogroup: CcP007]
Taxonomy Eukaryota Trypanosomatidae Leishmania
Organism Leishmania major    [TaxId: 5664 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LmCcP
start..stop
S start..stop
LinfCcP 675 0 1..341 1..341
LbraCcP 622 0 2..341 50..389
TcrCcP 371 2e-128 2..339 37..375
TbrCcP 358 2e-123 2..335 32..368
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 676400..676840 441  
complement(join(676400..676840))


exon

Literature and cross-references LmCcP
Literature Ivens,A.C., et al The genome of the kinetoplastid parasite, Leishmania major Science 309 (5733), 436-442 (2005)
Protein ref. GenPept:   CAJ04972 UniProtKB:   Q4QC30
DNA ref. GenBank:   FR796417.1 (676840..676400)
Protein sequence: LmCcP
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   341
PWM (Da):   %s   38191.26 Transmb domain:   %s   o30-52i
PI (pH):   %s   7.95
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MFKAPPKVGP GRKVTEEANP YKSWEHMNHT WLILMCLGCL CAGWLAGHFV EVDESKIKPK YAREDVVASA CKQFEFRPDL AATSIRTAFV LAARRAGFPA ETVDESCAVV RGLDDVAGIM  NYLSSTYPAS STEDVASLAA IAGIKYLNGP YEAILDQWRW GRNDSDTAPT RNIPKNPNQN VFSIPTILHA LGGLTEAECV ALLACHSVGE FHENVSGLES ATHTGRRYTL NNRYYQFLLE 
HERAFAPLTV ARTQYNKEVA TLPQTLRCVY VKENTNGKAK KRQCVVNAAE LELLKNKTWR ELVVRYAADE ELWREQFQSA FTKMIESNFK RLRPYSDPNS A 

Retrieve as FASTA  
Remarks Complete sequence from Genomic DNA (chromo 21, no intron). No EST. Distal histidine is lacking.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCCGGGAC GTGAGCTGCC AGCATCTCGC GGAGGTGCCC AAACCTCGAT GCCTGCCCGC AGAGTCGCCA CCCCATACGC ATCGCGACGA CCACCACGCA ATAACCCGGC ACGACCGGGA  TTAGCTGTCG GGCAACGCAC CGATGCCGGC CTTCCTACCA CCACCACCAC GACAGCAAGC AGGTCGGGTC AGAGATCCCC GGTTCCGGTG GAGGCAGCCC CAGCTTGTCC TTGCTGCGCT  GCGTGCTTAA AGGCGTTGCA GGAGGTACTG CACGCGTACA AGGCATTGCT GCTCAACTCA AAGCGACTTT TCATAGACGA CGCACTGCAC CACTACAACG GTGATGAGGC GTGGATTCGC 
GTACTGCGCT CGTTGGGCTG GTCCAATGAG CAGGCTCCAA CAACCGGCGT GGGGAGGAGA AGTGATCTCG CGCAGAGGTA G 

Retrieve as FASTA