Entry information : TcrAPx-CcP02
Entry ID 2480
Creation 2006-12-21 (Christophe Dunand)
Last sequence changes 2012-06-19 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-06-19 (Christophe Dunand)
Peroxidase information: TcrAPx-CcP02
Name TcrAPx-CcP02
Class Hybrid Ascorbate-Cytochrome C peroxidase    [Orthogroup: APx-CcP001]
Taxonomy Eukaryota Trypanosomatidae Trypanosoma
Organism Trypanosoma cruzi    [TaxId: 5693 ]
Cellular localisation Cytosolic
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value TcrAPx-CcP02
start..stop
S start..stop
TcrAPx-CcP01 676 0 1..328 1..328
LmexAPx-CcP01 406 1e-143 18..325 3..300
LbraAPx-CcP 400 3e-141 32..325 12..302
LseyAPx-CcP1 400 4e-141 34..324 33..321
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 13736..14722 987  
join(13736..14722)


exon

Literature and cross-references TcrAPx-CcP02
Literature El-Sayed N.M., Myler P.J., Blandin G., Berriman M., Crabtree J. et al. "Comparative genomics of trypanosomatid parasitic protozoa" Science 309:404-409 (2005)
Protein ref. UniProtKB:   Q4D2P4
DNA ref. GenBank:   AAHK01001145.1 (13736..14722)
Protein sequence: TcrAPx-CcP02
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   328
PWM (Da):   %s   36408.79  
PI (pH):   %s   7.44
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MVFCFGSFFS KYASSKSGFQ ARYRFLHSSA KIAAGATGAL LLGGATVALC YFPSGQKVTE APPFDVNSLR RDIEEILSED MSKGPLFVRL AWHEAGSWDC RKKDGSPNSA SMRFHPECSY  AGNKGLDKGR NALESLKKKY PKISYADLWS FAAVVSIEAM GGPEIPWRWG RVDAKDGSVC GPDGRLPDAS RMQDHVRDVF SRLGFNDEET VALIGAHTCG ECHLENTGYV GPWTHDKYGF 
DNSFFTELFG NEWMLNPNVK KMQFMDKTTN RLMMLPADVS ILLDDKYRSI AKKYADDNDY FCNAFSKAYQ KLLEVGTTNL KSLPAESK 

Retrieve as FASTA  
Remarks Complete sequence from genomic (no intron). Annotated as Ascorbate peroxidase (unspecific ascorbate peroxidase activity!!!), but the sequence contains CcP motifs.
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGTTTTTT GTTTTGGTTC ATTCTTTTCG AAGTACGCTT CATCCAAATC AGGTTTTCAG GCAAGGTACC GTTTTCTTCA TTCCTCGGCT AAAATTGCTG CTGGCGCCAC CGGTGCATTG  CTTTTGGGCG GTGCCACCGT GGCCTTATGT TATTTTCCCT CGGGACAAAA GGTCACGGAG GCACCCCCGT TTGATGTGAA CTCACTAAGA AGGGACATTG AAGAAATACT CTCCGAGGAC  ATGTCTAAAG GACCTCTTTT TGTGCGACTC GCGTGGCACG AGGCTGGATC ATGGGACTGC CGGAAAAAGG ATGGGAGTCC TAATTCCGCT TCGATGCGAT TTCACCCAGA GTGCAGCTAT  GCCGGCAACA AAGGGCTTGA TAAAGGACGA AATGCGCTGG AATCGCTCAA GAAAAAGTAC CCGAAAATTT CATACGCCGA TTTATGGTCC TTCGCAGCGG TGGTGTCGAT TGAGGCGATG  GGCGGCCCGG AGATTCCGTG GCGGTGGGGG CGCGTGGATG CAAAGGACGG CAGCGTTTGT GGCCCCGATG GGCGTCTCCC TGACGCATCC AGGATGCAGG ATCACGTGCG GGATGTCTTT  TCACGTCTTG GCTTTAATGA TGAAGAAACT GTTGCCTTGA TCGGGGCCCA CACATGTGGT GAGTGCCATC TGGAGAACAC GGGCTACGTG GGTCCGTGGA CGCACGACAA GTACGGCTTT  GACAACTCCT TTTTTACGGA GCTTTTTGGC AACGAGTGGA TGCTGAACCC CAATGTGAAG AAAATGCAGT TCATGGACAA AACCACTAAT CGCCTTATGA TGCTGCCCGC TGATGTTTCC  ATTCTTCTGG ACGACAAATA TCGCTCCATC GCGAAGAAGT ACGCGGACGA CAATGATTAT TTTTGCAACG CCTTCAGCAA GGCTTATCAG AAGTTGCTTG AGGTTGGAAC CACCAATCTC 
AAGTCTCTCC CAGCAGAGTC AAAATAG 

Retrieve as FASTA  
CDS
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGTTTTTT GTTTTGGTTC ATTCTTTTCG AAGTACGCTT CATCCAAATC AGGTTTTCAG GCAAGGTACC GTTTTCTTCA TTCCTCGGCT AAAATTGCTG CTGGCGCCAC CGGTGCATTG  CTTTTGGGCG GTGCCACCGT GGCCTTATGT TATTTTCCCT CGGGACAAAA GGTCACGGAG GCACCCCCGT TTGATGTGAA CTCACTAAGA AGGGACATTG AAGAAATACT CTCCGAGGAC  ATGTCTAAAG GACCTCTTTT TGTGCGACTC GCGTGGCACG AGGCTGGATC ATGGGACTGC CGGAAAAAGG ATGGGAGTCC TAATTCCGCT TCGATGCGAT TTCACCCAGA GTGCAGCTAT  GCCGGCAACA AAGGGCTTGA TAAAGGACGA AATGCGCTGG AATCGCTCAA GAAAAAGTAC CCGAAAATTT CATACGCCGA TTTATGGTCC TTCGCAGCGG TGGTGTCGAT TGAGGCGATG  GGCGGCCCGG AGATTCCGTG GCGGTGGGGG CGCGTGGATG CAAAGGACGG CAGCGTTTGT GGCCCCGATG GGCGTCTCCC TGACGCATCC AGGATGCAGG ATCACGTGCG GGATGTCTTT  TCACGTCTTG GCTTTAATGA TGAAGAAACT GTTGCCTTGA TCGGGGCCCA CACATGTGGT GAGTGCCATC TGGAGAACAC GGGCTACGTG GGTCCGTGGA CGCACGACAA GTACGGCTTT  GACAACTCCT TTTTTACGGA GCTTTTTGGC AACGAGTGGA TGCTGAACCC CAATGTGAAG AAAATGCAGT TCATGGACAA AACCACTAAT CGCCTTATGA TGCTGCCCGC TGATGTTTCC  ATTCTTCTGG ACGACAAATA TCGCTCCATC GCGAAGAAGT ACGCGGACGA CAATGATTAT TTTTGCAACG CCTTCAGCAA GGCTTATCAG AAGTTGCTTG AGGTTGGAAC CACCAATCTC 
AAGTCTCTCC CAGCAGAGTC AAAATAG 

Retrieve as FASTA