Entry information : AacAPx-R
Entry ID 2508
Creation 2006-08-10 (Nenad Bakalovic)
Last sequence changes 2011-05-09 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2011-05-09 (Christophe Dunand)
Peroxidase information: AacAPx-R
Name AacAPx-R
Class Ascorbate peroxidase related    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Chlorophyta Ulvophyceae Polyphysaceae Acetabularia
Organism Acetabularia acetabulum    [TaxId: 35845 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value AacAPx-R
start..stop
S start..stop
CbrebAPx-R01 196 7e-65 2..190 1..190
CbrebAPx-R02 195 3e-63 2..190 71..260
CreAPx-R 196 5e-63 1..187 146..334
CirAPx-R01 187 7e-61 1..190 43..229
Literature and cross-references AacAPx-R
Literature Keeling,P.J.TBestDB[http://tbestdb.bcm.umontreal.ca/searches/login.php]. Acetabularia acetabulum.
EST ref. GenBank:   EC096934.1 [3' end]
Protein sequence: AacAPx-R
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   185
PWM (Da):   %s   20298.34  
PI (pH):   %s   4.78
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
FELDRPENFG LKRGWKLIGE VQKSVEGTPL AFLLSPADII ALAGAYSVKA TGGPAIEVKI GRVAA*EADP EERIPGEDLN VE*IKQYF*R AGFTT*EMVA LSGAHTIGGK GFGNPSKFDN 
TYYKTLIQKP WDDPKNEMGK MIGIPTDRLI ATDEECLTHI NTYVND*KAF FTDFRDAYVK MVNLGVTEFP 

Retrieve as FASTA  
Remarks Partial sequence from 1 EST. Several stop codons in the sequence.
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
AGTTTGAATT AGACCGTCCC GAAAATTTTG GATTAAAGAG GGGATGGAAA TTAATTGGAG AAGTTCAGAA AAGCGTGGAA GGAACGCCGC TTGCATTTTT ATTATCTCCC GCGGACATAA  TAGCGTTGGC CGGAGCTTAT AGTGTAAAAG CGACTGGAGG ACCTGCAATT GAAGTAAAGA TTGGGCGAGT GGCAGCCTAG GAAGCTGATC CTGAGGAGCG AATACCGGGA GAAGATTTAA  ATGTTGAGTA GATAAAACAA TACTTTTAAA GGGCAGGTTT TACAACATAA GAAATGGTGG CTTTGTCGGG GGCACATACG ATCGGTGGCA AAGGATTCGG AAACCCATCC AAATTCGATA  ATACGTATTA CAAAACTCTT ATCCAAAAAC CTTGGGATGA TCCAAAAAAC GAGATGGGCA AAATGATAGG TATCCCCACG GACAGGCTAA TTGCTACAGA CGAAGAATGT TTAACTCACA  TTAATACATA TGTTAATGAT TAAAAAGCAT TTTTTACAGA TTTTCGGGAT GCTTATGTTA AAATGGTAAA TTTAGGTGTC ACAGAATTCC CTTAATGATT ATGATTTTGT TTTGGATTTT 
TGCCATCTAG TTCATACATA AAAAATGGTA GTATTTGTTG CAGTATGTCG ATGTTTACTT TTTACTTTTA ACCAGTGACA ACGTTGAGCG CAAAAAAAAA AAAAAAAAAA AAAAAAA 

Retrieve as FASTA