Entry information : KbCP01
Entry ID 2527
Creation 2010-05-06 (Christophe Dunand)
Last sequence changes 2010-05-06 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2010-05-06 (Christophe Dunand)
Peroxidase information: KbCP01
Name KbCP01
Class Catalase peroxidase     [Orthogroup: CP002]*
Taxonomy Eukaryota Dinophyceae Gymnodiniaceae Karenia
Organism Karenia brevis    [TaxId: 156230 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value KbCP01
start..stop
S start..stop
SymCP2_clade_D 457 2e-159 25..423 19..423
VcaCP01 407 3e-136 48..387 57..402
VcaCP01 85 9e-18 80..171 465..555
VcaCP01 53 0.0000001 299..388 609..697
PulCP01 394 3e-131 42..450 44..444
PulCP01 84 2e-17 81..183 456..557
PulCP01 56 0.00000002 299..388 599..682
CreCP01 376 3e-123 45..387 45..393
CreCP01 79 6e-16 79..153 456..530
CreCP01 50 0.000001 299..388 629..718
Literature and cross-references KbCP01
Literature Lidie,K.B., Ryan,J.C., Barbier,M., Almeida,J.S., Chen,Y., McKillen,D.J. and Van Dolah,F.M. Karenia brevis EST Library (L99-05) at marinegenomics.org. Unpublished (2004)
EST ref. GenBank:   EX964086.1 [5' end]   EX965709.1 [3' end]   CO059914.1 [Fragment]
Protein sequence: KbCP01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   476 (455)
PWM (Da):   %s   51590.04 (49458.9) Transmb domain:   %s   o436-458i
PI (pH):   %s   6.07 (5.87) Peptide Signal:   %s   cut: 22 range:22-476
Sequence
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Send to Peroxiscan
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MQSKAIVIAL ATALFTSNTL GYDVCQHMEK GTPPENRADA PSPEEYDRAL ETLDMEAVKA DMTALLADSK DCWPADYGNY GPFMVRLAWH CSGSYRTSDG AGGCGGGRQR FEPERSWPDN  TNLDKARALL YPLKEKYGDA LSWGDLFILA GTTALRDAGA PIKQMCFGRM DDSDGAKSVM LGPTALQAEK MPCAINGKCK LPLGATTVGL VYVNPEGPMA NPDPSLSAKD IRQTFSSMGH  CPHMTTALIG GGHTLGKGHG ACPKGAGLAP NEAYNMTPRA VPWVGQCGTG KGKDTVTAGF EGAWTTNPLK WDNEYFKWLV EKDWEKHVGP GGHWQWRIKD SDEKVMRLTA DMALLHDPMY 
RQIVELFAKD MDAFNRVFDA AWYGLTVASG SGTWSKAAKC DNGPFPEELR KTSAYMFNSD VTLAETEKPL EQLFKGVTLL SAMAVAGASA ATVSVVMMRF RKQATDETGT PFLYMA 

Retrieve as FASTA  
Remarks Partial sequence from 39 ESTs. Only one Peroxidase domain!!!
cDNA
Send to BLAST
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CTGAGCTTCA GCCCCTCATT GCTCGCAAAC TCGTGCAATT CGTGCGAGCA TTTGAGTTAG AGTGTTCCAA GTCAGAAGTG GGCGAGATGC AATCGAAAGC CATCGTGATC GCTTTGGCCA  CCGCTCTTTT CACAAGCAAC ACACTTGGCT ATGACGTCTG CCAGCACATG GAAAAGGGCA CACCTCCCGA GAACAGGGCA GATGCGCCCA GCCCAGAAGA GTATGACAGG GCTCTGGAGA  CCCTTGACAT GGAAGCTGTG AAAGCAGACA TGACGGCCTT GCTTGCAGAT TCCAAAGACT GCTGGCCTGC CGACTACGGC AACTATGGTC CTTTCATGGT GCGTCTTGCG TGGCATTGTT  CTGGCTCGTA CCGTACATCA GATGGGGCGG GCGGTTGTGG AGGTGGCCGC CAACGCTTTG AGCCTGAACG GAGCTGGCCT GACAACACAA ATCTCGACAA GGCCCGCGCG CTTCTGTATC  CATTGAAGGA AAAATATGGT GATGCACTGA GTTGGGGCGA TCTGTTCATC CTGGCAGGCA CAACTGCTCT TCGGGACGCA GGCGCACCGA TCAAGCAGAT GTGTTTCGGT CGCATGGATG  ACAGTGACGG TGCCAAGAGT GTGATGTTAG GACCAACTGC ACTGCAGGCC GAAAAGATGC CTTGTGCTAT CAATGGCAAG TGCAAAGCCC CTCTTGGCGC CACAACTGTT GGTCTTGTCT  ACGTCAATCC CGAGGGCCCT ATGGCCAATC CAGATCCATC GCTCAGTGCC AAGGACATTC GCCAAACTTT CTCAGGTATG GGCCACTGTC CTCATATGAC CACGGCCCTG ATTGGTGGCG  GCCATACTCT TGGCAAAGGT CATGGCGCGT GTCCAAAAGG GGCTGGTTTG GCACCTAATG AGGCATATAA CATGACTCCT CGTGCAGTTC CTTGGGTAGG GCAATGTGGC ACTGGAAAGG  GTAAGGACAC CGTCACTGCT GGCTTCGAAG GTGCCTGGAC AACTAATCCC CTCAAATGGG ACAACGAATA CTTCAAATGG CTCGTTGAGA AGGACTGGGA GAAGCATGTA GGTCCTGGTG  GGCATTGGCA ATGGCGCATC AAAGACTCTG ACGAGAAGGT TATGAGGCTG ACAGCTGACA TGGCACTGCT GCATGATCCC ATGTATCGGC AGATAGTGGA GCTCTTCGCC AAGGACATGG  ATGCCTTCAA CCGGGTATTC GATGCAGCAT GGTATGGCCT CACAGTGGCG TCTGGTTCTC GGGTACATGG TCAAAAGCTG CCAAGTGTGA CAATGGGCCC TTCCCTGAAG AACTGCGGAA  AACAAGTGCT TACATGGTCA ACAGTGATGT TACTTTGGCT GAGACAGAGA AACCTTTGGA ACAGTCGTTC AAGGGCGTGA CACTGCTCAG TGCAATGGCA GTGGCCGGGG CATCAGCAGC  GACAGTTTCT GTTGTCATGA TGCGGTTCCG CAAGCAAGCC ACAGATGAAA CCGGCACACC CTTTTTGTAC ATGGCCTAGG GGAGAATTGT GTCGAGAAGT TCCCAGCGAG TTGCGCGGGA  AACTCAGTAT GTAAAGATTG TACTCCCGAT TTGTGCCGCA AGCAGTTCAT GGTGAGGTGA GCCGGAACAA TTTCTTTGTA CAGTCTTATG CACAGCACTC TTCTTCATGA TATTCCACAA 
TTCGAGCCGG CATCATTGGT TGTCAGGCAC TCAAGGATCA ACTGTGTCAT CTTTTGCAAT GAGAATAAAT CTTAGAC 

Retrieve as FASTA