Entry information : PiCP01
Entry ID 2543
Creation 2008-11-24 (Christophe Dunand)
Last sequence changes 2011-05-13 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-01-12 (Christophe Dunand)
Peroxidase information: PiCP01
Name PiCP01
Class Catalase peroxidase    [Orthogroup: CP002]
Taxonomy Eukaryota Phytophthora
Organism Phytophthora infestans    [TaxId: 4787 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PiCP01
start..stop
S start..stop
PcapCP01 1193 0 1..690 1..674
PsojCP 1189 0 1..690 1..687
PcapCP02 1182 0 1..690 1..687
PsojCP03 1177 0 1..690 1..687
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 Compleement12370..14442 14443  
Compleement(join(12370..14442))


exon

Literature and cross-references PiCP01
Literature Randall,T., Dwyer,R.A., Huitema,E., Beyer,K., Cvitanich,C., Kelkar,H., Fong,A.M., Gates,K., Roberts,S., Yatzkan,E., Gaffney,T., Law,M., Testa,A., Torto-Alalibo,A., Zhang,M., Zheng,L., Mueller,E., Windass,J., Binder,A., Birch,P.R.J., Gisi,U., Govers,F., Gow,N.A.,Mauch,F., van West,P., Waugh,M.E., Yu,J., Boller,T., Kamoun,S., Lam,S.T. and Judelson, H.S. Large-scale gene discovery in the oomycete Phytophthora infestans reveals likely components of phytopathogenicity shared with true fungi. Mol. Plant-Microbe Interact. 18 (3), 229-243 (2005)
Protein ref. UniProtKB:   D0N7D7
DNA ref. GenBank:   AATU01001725 (14442..12370)
EST ref. GenBank:   CV952269 [5' end]
Protein sequence: PiCP01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   690 (669)
PWM (Da):   %s   74220.73 (72194.6)  
PI (pH):   %s   5.04 (5.03) Peptide Signal:   %s   cut: 22 range:22-690
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MNVRLAAFVA ALASLAAGID AGRSGSCPFG FDKVASVKEQ DRQISSELYD PKSCEVINYD LVKADLEKLM TDSQAFWPAD FGHYGGLFIR LAWHCNGTYR RADGRGGCDG GRIRFNPEHS  WEDNTNLDKA LKLLNPIKEK YGDALSWGDL IVLSGDVAIK SMGGPVLGFC GGRRDDADGT SSLQLGPSAE QESVAPCEVN GQCKEPLGPT TMGLIYVNPE GPMGKPDPVG SVADVRDTFK  RMGMNDRETV ALIGGGHAFG KTHGACPSGP GPSPLKDPEN PWPGTCGEGE MKGKGNNTFT SGFEGQWTFT PTKWGNGYFK GLTSFEWEKF DGPGGHVQWR PVPDTNPPVR MLTADIALLH  DESYLKISKE FAADQAALDE AFSHAWYKLV SRDMGPVARC RGSDIPPVQP FQNPLPPTPE NLPDFDAVRA DIKGLLTKSV DGLPSDSSSD GKAYNGALFV HAAWQCASTF RITDYAGGCN  GAKIRFAPQK DWPVNAGVDK IIAALEPIKE KYPTLSTADL IVLAGQVALE DAGKVKIDFL GGRTDGQNGD GDEILAPREY YNSSVTAVRD NIKILGVSPD EAVALAARPR SAAQQKVLGF 
SGSYSNSSAT LSNEYFKVLL NETWTPVSKK EFKAGAKDIY MLDTDLALLE APELKATVEK FASNDFAFKQ TFAKAWNKVM TADHFNADSY 

Retrieve as FASTA  
Remarks Complete sequence from genomic (no intron) and 1 EST.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAACGTCC GTCTTGCCGC CTTCGTTGCC GCCCTCGCCA GTCTTGCCGC CGGTATTGAC GCTGGCCGAT CGGGAAGCTG CCCATTCGGC TTCGACAAGG TCGCGTCTGT CAAGGAGCAG  GACCGTCAGA TCTCCAGCGA GCTGTACGAC CCCAAGAGCT GTGAGGTGAT CAACTATGAC CTTGTGAAGG CAGACCTCGA GAAGCTGATG ACGGACTCAC AGGCTTTCTG GCCCGCAGAC  TTCGGCCACT ACGGTGGTCT CTTCATCCGT CTGGCTTGGC ACTGCAACGG CACGTACCGT CGTGCTGACG GCCGCGGCGG CTGTGACGGC GGCCGTATCC GCTTCAATCC GGAGCACAGC  TGGGAAGACA ACACTAACTT GGACAAGGCT TTGAAGCTGC TGAACCCCAT CAAGGAGAAG TATGGCGACG CCCTCTCATG GGGTGACCTC ATTGTGCTGT CGGGTGACGT TGCTATTAAG  AGCATGGGTG GACCGGTGCT CGGATTCTGC GGTGGTCGTC GTGATGATGC TGATGGCACG AGCAGTCTGC AGCTAGGCCC TTCGGCCGAG CAGGAGAGCG TGGCCCCGTG TGAGGTGAAT  GGCCAGTGCA AGGAGCCTCT TGGCCCCACC ACAATGGGTC TTATCTACGT GAACCCTGAG GGTCCCATGG GCAAGCCCGA CCCGGTTGGA TCCGTTGCCG ACGTGCGCGA CACATTCAAG  CGCATGGGCA TGAACGACCG CGAGACGGTG GCTCTGATCG GTGGTGGCCA CGCTTTTGGT AAGACACACG GTGCCTGTCC GTCGGGTCCT GGTCCTTCTC CGTTGAAGGA CCCTGAGAAC  CCGTGGCCCG GCACCTGTGG TGAAGGCGAG ATGAAGGGCA AGGGCAACAA CACGTTCACC AGTGGCTTTG AGGGTCAGTG GACATTCACG CCCACCAAGT GGGGCAACGG CTACTTCAAG  GGTCTCACCA GCTTCGAGTG GGAGAAGTTC GACGGCCCCG GTGGCCACGT CCAGTGGCGC CCGGTGCCCG ACACGAACCC TCCCGTTCGT ATGTTAACGG CCGATATCGC GCTGCTGCAC  GATGAGAGCT ACCTCAAGAT CTCTAAGGAG TTCGCCGCTG ACCAGGCTGC TCTGGACGAG GCATTCTCAC ACGCCTGGTA CAAGCTCGTG TCGCGTGACA TGGGTCCGGT TGCTCGTTGC  CGCGGTAGCG ACATCCCCCC TGTTCAGCCG TTCCAGAACC CGCTACCCCC GACGCCCGAG AACCTGCCGG ACTTCGACGC TGTTCGTGCG GACATCAAGG GGCTGCTTAC TAAGTCCGTG  GACGGTCTTC CGAGCGACTC GAGCAGCGAT GGCAAGGCGT ACAACGGCGC CCTGTTCGTC CACGCCGCTT GGCAGTGCGC CTCAACGTTC CGTATCACGG ACTACGCTGG CGGCTGCAAC  GGCGCTAAGA TCCGCTTTGC GCCGCAGAAG GACTGGCCCG TGAACGCTGG TGTCGACAAG ATCATCGCTG CTCTTGAGCC TATTAAGGAG AAGTACCCCA CGCTATCGAC TGCTGACCTC  ATCGTGCTGG CCGGCCAGGT TGCCCTTGAG GACGCTGGCA AGGTAAAGAT CGACTTCCTT GGTGGCCGTA CGGACGGTCA GAACGGCGAC GGCGACGAGA TTCTGGCCCC GCGTGAGTAC  TACAACTCGT CGGTGACAGC TGTGCGTGAC AACATTAAGA TCCTGGGTGT GTCGCCGGAT GAGGCCGTGG CTCTTGCCGC TCGCCCGCGT AGTGCTGCGC AGCAGAAGGT GCTGGGCTTC  AGCGGCTCGT ACAGCAACAG CTCGGCTACG CTGTCCAACG AATACTTCAA GGTGCTGCTG AACGAGACGT GGACGCCCGT GTCCAAGAAG GAGTTCAAGG CCGGTGCCAA GGACATCTAC  ATGCTCGACA CGGATCTGGC ACTGCTCGAA GCGCCTGAGC TCAAGGCGAC GGTGGAGAAG TTCGCCTCCA ACGATTTCGC CTTCAAGCAG ACGTTCGCCA AGGCCTGGAA CAAGGTCATG 
ACGGCCGACC ACTTCAATGC CGACAGCTAC TAA 

Retrieve as FASTA