Entry information : AcaAPx-CcP01
Entry ID 2546
Creation 2006-11-06 (Nenad Bakalovic)
Last sequence changes 2012-05-15 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2012-05-15 (Christophe Dunand)
Peroxidase information: AcaAPx-CcP01
Name AcaAPx-CcP01
Class Hybrid Ascorbate-Cytochrome C peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Dinophyceae Gymnodiniaceae Amphidinium
Organism Amphidinium carterae    [TaxId: 2961 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value AcaAPx-CcP01
start..stop
S start..stop
AcaAPx-CcP02 388 3e-138 2..225 64..287
TpsCcP04 113 8e-30 48..225 53..224
TpsAPx05 108 6e-29 67..223 13..162
SYgrAPx02 72 0.000000000000001 51..223 36..215
Literature and cross-references AcaAPx-CcP01
Literature Bachvaroff,T.R. et al., Dinoflagellate expressed sequence tag data indicate massive transfer of chloroplast genes to the nuclear genome, Protist 155 (1), 65-78 (2004)
DNA ref. GenBank:   CF067296.1
Protein sequence: AcaAPx-CcP01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   238
PWM (Da):   %s   25884.11  
PI (pH):   %s   4.73
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
HCPNAPVQTT ESLTCAQYDA IVSTIRNIYT QLDTRCTATE CPQADWAGCV LRVAGHDFMD FGDGEGGSDG CLDLFDPDNA GLPECLHSGE FGFSIQDAYS AHCSEISLAD FIVLAAEAVI 
TFSREHATGG NTDMDLKSKF KFGRTTAARC EFAEGRLPNP EDSCDAVDAT FRTRMGLSWR RSAALMGVHS LGRARPENSG YDGWWSDAVN SRKFNNNYYA SIVGRLDARA SQRKQEPx 

Retrieve as FASTA  
Remarks Partial sequence from 1 EST. Is it an ascorbate peroxidase?
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
CACTGCCCAA ACGCACCTGT GCAGACAACC GAAAGCCTCA CTTGTGCGCA GTACGACGCG ATCGTGAGCA CTATTCGGAA CATCTACACG CAGCTAGACA CCAGGTGCAC CGCGACAGAG  TGTCCTCAAG CGGATTGGGC AGGTTGTGTG CTCCGTGTCG CAGGTCACGA CTTCATGGAT TTTGGGGATG GGGAAGGCGG TAGCGATGGC TGTCTGGATT TGTTCGACCC AGACAACGCA  GGCTTACCAG AGTGCCTTCA TAGTGGTGAG TTCGGCTTCT CGATCCAGGA TGCATACAGC GCCCATTGCT CTGAAATCTC CCTCGCTGAC TTCATTGTCT TGGCTGCTGA GGCTGTGATC  ACCTTCTCGC GAGAGCATGC CACTGGGGGA AACACGGACA TGGACTTGAA GAGCAAGTTC AAATTTGGTC GTACGACTGC TGCGCGCTGT GAATTTGCCG AGGGGCGCTT GCCAAACCCT  GAAGATAGTT GTGATGCTGT CGATGCGACA TTCCGCACGC GCATGGGTCT GTCGTGGCGT CGGTCGGCAG CACTGATGGG CGTGCACAGT CTCGGTCGTG CGAGACCTGA GAACTCTGGG 
TACGATGGTT GGTGGAGTGA TGCAGTGAAC AGCAGGAAGT TCAACAACAA CTACTATGCG TCCATCGTTG GAAGGCTGGA TGCCCGAGCA TCTCAGCGCA AACAAGAACC AnTG 

Retrieve as FASTA