Entry information : TpsCcP01
Entry ID 2553
Creation 2008-08-13 (Christophe Dunand)
Last sequence changes 2008-08-13 (Christophe Dunand)
Sequence status complete
Reviewer Michele Oliva
Last annotation changes 2008-08-13 (Christophe Dunand)
Peroxidase information: TpsCcP01
Name TpsCcP01
Class Cytochrome C peroxidase    [Orthogroup: CcP004]
Taxonomy Eukaryota Bacillariophyta Coscinodiscophyceae Thalassiosiraceae Thalassiosira
Organism Thalassiosira pseudonana    [TaxId: 35128 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value TpsCcP01
start..stop
S start..stop
PtrCcP01 438 3e-156 1..307 1..311
ShenCcP03 352 6e-123 37..305 1..269
HfuCcP02 352 6e-123 37..305 1..269
SYgrCcP02 336 6e-117 37..307 1..265
Literature and cross-references TpsCcP01
Literature Armbrust,E.V.,et al., .The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and metabolism
Science 306 (5693), 79-86 (2004)
DNA ref. GenBank:   AAFD01000242 (41361..42646)
EST ref. GenBank:   FC520750.1 [5' end]   FC520749.1 [3' end]
Protein sequence: TpsCcP01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   307
PWM (Da):   %s   33513.58  
PI (pH):   %s   5.47
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MMNAARLGTK YATPAAVTLI ALSPSIVEAK EASKTTDVTA VKKSIAEVIE EDAEKRGDGT SLTGTFVRLA WHCAGTYSKE DGSGGSNGAR MRFNPEASWG ANAGLDLPRK VLESVKEKHP  DISYADLYTL SGVVAVEEAG GPKIPFRLGR TDADSGETSP KTCGLPDADK GSRANTTQHV RDVFYRMGFN DREIVALLGA HALGRCHTDR SGYWGPWTFA ENTFSNEYFR LLVEERWSPK 
MSHNGKPWEG PDQYEDSTGK LMMLPSDMIL VQDPTFKKVE LYAKDEDAFF KDFASAFSKL LELGVDF 

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 13, 3 introns)and 6 ESTs. Strain="CCMP1335".