Entry information : TpsCcP02
Entry ID 2556
Creation 2005-11-16 (Nenad Bakalovic)
Last sequence changes 2005-11-16 (Nenad Bakalovic)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2012-06-04 (Christophe Dunand)
Peroxidase information: TpsCcP02
Name TpsCcP02
Class Cytochrome C peroxidase    [Orthogroup: CcP004]
Taxonomy Eukaryota Bacillariophyta Coscinodiscophyceae Thalassiosiraceae Thalassiosira
Organism Thalassiosira pseudonana    [TaxId: 35128 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value TpsCcP02
start..stop
S start..stop
OCgrCcP02 353 4e-123 76..340 1..259
PlCcP04 332 9e-115 70..342 9..275
BnaCcP04 325 5e-112 75..345 4..265
BprCcP03 325 7e-110 49..339 123..407
Literature and cross-references TpsCcP02
Literature Madera, M. et al., The SUPERFAMILY database in 2004: additions and improvements, Nucl. Acids Res., 32, D235-D239.
DNA ref. JGI genome:   scaffold_6 (553994..595194)
EST ref. GenBank:   FC508779.1 [5' end]   FC521774.1 [3' end]
Cluster/Prediction ref. JGI gene:   151372
Protein sequence: TpsCcP02
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   345
PWM (Da):   %s   36994.76  
PI (pH):   %s   7.16
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MKVQAILSSL LFTGARTFAP AFLSHTRTTL HAANVGDLPD SNRRRELLSA PFLALIATSA SSPVNAFGAK NKAADYKAVA SDIASIVKDD PDKGPTLVRL AWHSSGTYDK MSKDGGSGGG  TIRFREELAH GGNAGLGSTA VVWLEDVKKK YGDSLSYADL YTLGGVVAIK ELGGPTIKWS SGRVDALDPS AVTPDGRLPN ADSGPAGSDP SDAAHLRTIF NRMGFNDQEI VALSGAHALG 
RCRPSASGYD GPWTPLPTTF NNLYFSLLNQ IKWAKRDWSG PFQYEDDGKK LMMLPTDLVL IQDAEFKKYV DLYAGDQNKF FSDFSKAFNK LEELGTTGLV ATQWS 

Retrieve as FASTA  
Remarks Complete sequence from genomic and 4 ESTs.