Entry information : TpsAPx-CcP01
Entry ID 2557
Creation 2006-02-07 (Nenad Bakalovic)
Last sequence changes 2006-02-07 (Nenad Bakalovic)
Sequence status complete
Reviewer reviewer name not stored
Last annotation changes 2010-08-31 (Christophe Dunand)
Peroxidase information: TpsAPx-CcP01
Name TpsAPx-CcP01
Class Hybrid Ascorbate-Cytochrome C peroxidase    [Orthogroup: APx-CcP001]
Taxonomy Eukaryota Bacillariophyta Coscinodiscophyceae Thalassiosiraceae Thalassiosira
Organism Thalassiosira pseudonana    [TaxId: 35128 ]
Cellular localisation Cytosolic
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value TpsAPx-CcP01
start..stop
S start..stop
OCgrAPx-CcP03 354 7e-125 11..257 1..249
EhuxAPx-CcP03 352 2e-123 2..265 21..289
OCgrCcP05 346 6e-122 21..257 1..239
SymAPx-CcP1_F1 271 1e-90 9..255 136..380
Literature and cross-references TpsAPx-CcP01
Literature Madera, M. et al., The SUPERFAMILY database in 2004: additions and improvements, Nucl. Acids Res., 32, D235-D239.
DNA ref. JGI genome:   scaffold_124 (46890..63734)
mRNA ref. JGI transcript:   118915
EST ref. GenBank:   FC528601.1 [5' end]   FC528600.1 [3' end]
Protein sequence: TpsAPx-CcP01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   265
PWM (Da):   %s   28700.27  
PI (pH):   %s   5.38
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MSSLDTIKSD LKNLVSTKNC GPILIRLNWH DAGVYSTGSL TGGCPNAVMR FTDGGEGTFG ANAGLPDVAL GLLKEISDKY GVISHADLWT LAANVAIEVM GGPVIPTRFG RKDAVDSSAS  VESQVGRLPD ADKGCPHLRK IFHPKGFTDK DIVALSGAHT VGRCHGDRSG FEGAWTETPL KFDNSYFKEM LAKEYTDETT PKGCPQKKHG ETGTIMLISD LALLEQPFRE WVELYAKDEE 
AFFKDYTAAW VKLQENGCEG LRDTL 

Retrieve as FASTA  
Remarks Complete sequence from genomic and ESTs.