Entry information : TpsAPx02
Entry ID 2558
Creation 2005-11-17 (Nenad Bakalovic)
Last sequence changes 2005-11-17 (Nenad Bakalovic)
Sequence status complete
Reviewer reviewer name not stored
Last annotation changes 2010-08-31 (Christophe Dunand)
Peroxidase information: TpsAPx02
Name TpsAPx02
Class Ascorbate peroxidase    [Orthogroup: APx002]
Taxonomy Eukaryota Bacillariophyta Coscinodiscophyceae Thalassiosiraceae Thalassiosira
Organism Thalassiosira pseudonana    [TaxId: 35128 ]
Cellular localisation Stromal
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value TpsAPx02
start..stop
S start..stop
TocAPx01 491 3e-177 24..330 3..309
PtrAPx01 476 8e-171 18..330 19..331
GtAPx02 444 8e-158 19..327 46..357
GtAPx01 399 4e-140 17..319 24..336
Literature and cross-references TpsAPx02
Literature Madera, M. et al., The SUPERFAMILY database in 2004: additions and improvements, Nucl. Acids Res., 32, D235-D239.
DNA ref. JGI genome:   chr_6 (419136..420171)
mRNA ref. JGI transcript:   111777
Protein sequence: TpsAPx02
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   330 (314)
PWM (Da):   %s   35493.64 (33896.9)  
PI (pH):   %s   4.79 (4.72) Peptide Signal:   %s   cut: 17 range:17-330
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MKFSAAFLAC VATANAFTVP SSIKTTRAVT SLAVSQKDLD GAQAAIDEII KEKNCGPVFV RLAWHDSGTF DVNINEAWPA AGGAIGSIRF EPEINHGANA GLAGAVKLLE PVKEAFPEVS  YADIFQMASA RSIELAAGPK IDMKYGRKDA TSPEQCSPEG NLPDAEAGPE GKFGGTSGTK PTEDTSVAWH LRKVFYRMGL GDEEIVALSG AHTFGRAYED RSGLGAWKTK FTDGSKVKLA 
DGSETDKYTP GGSPWVENWL VFDNSYFTTI PDASTDEELL KLTSDKILFE DHGFKPFAEK FRDDKDAFFA SYAKAHKALS ELGSEFEKIE 

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 6, no intron).