Entry information : TpsAPx05
Entry ID 2561
Creation 2005-12-28 (Nenad Bakalovic)
Last sequence changes 2005-12-28 (Nenad Bakalovic)
Sequence status complete
Reviewer reviewer name not stored
Last annotation changes 2010-08-31 (Christophe Dunand)
Peroxidase information: TpsAPx05
Name TpsAPx05
Class Ascorbate peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Bacillariophyta Coscinodiscophyceae Thalassiosiraceae Thalassiosira
Organism Thalassiosira pseudonana    [TaxId: 35128 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value TpsAPx05
start..stop
S start..stop
TpsCcP04 304 2e-102 1..291 64..353
AcaAPx-CcP02 113 9e-30 13..178 129..301
AcaAPx-CcP01 108 8e-29 13..162 67..223
SYgrAPx03 82 3e-19 12..162 30..186
Literature and cross-references TpsAPx05
Literature Madera, M. et al., The SUPERFAMILY database in 2004: additions and improvements, Nucl. Acids Res., 32, D235-D239.
DNA ref. JGI genome:   scaffold_93 (48566..93430)
mRNA ref. JGI transcript:   162046
Protein sequence: TpsAPx05
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   291
PWM (Da):   %s   32628.29  
PI (pH):   %s   5.91
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MDFDRRDKSN PMGSDGCFDP MNPSNSGLPE SVWCTDCLLR KLYEAKYRSL SRADFWIASA NAVIRQTSRN NALDMKEMFT WGRKDAASCR GSADRLPDAT GCKEVETAFL TRMGLEWRDA  AALLGAHSLG RGNATFSGHE GTWVDNANDA QVFDKQYYEE LINNSWRPRN RGLENQDWTT GNNLANQRMM LNTDICLVYN IDNNPNCCTR TDQFFPNGQS KCMSNDLARN KCQLYGQRDS 
RWAATEAVVE FVGGARANRN NEPFYTAFAE AWRKATTNGW SDLAPLTGSC S 

Retrieve as FASTA  
Remarks Complete sequence from genomic. Is it an ascorbate peroxidase????