Entry information : CmeAPx01 (CmstAPX / CYME_CMM158C)
Entry ID 2611
Creation 2005-12-28 (Nenad Bakalovic)
Last sequence changes 2015-08-04 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2015-08-07 (Christophe Dunand)
Peroxidase information: CmeAPx01 (CmstAPX / CYME_CMM158C)
Name (synonym) CmeAPx01 (CmstAPX / CYME_CMM158C)
Class Ascorbate peroxidase    [Orthogroup: APx002]
Taxonomy Eukaryota Bangiophyceae Cyanidiaceae Cyanidioschyzon
Organism Cyanidioschyzon merolae    [TaxId: 45157 ]
Cellular localisation Chloroplastic
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CmeAPx01
start..stop
S start..stop
CspAPx01 310 6e-105 80..369 27..319
SsAPx04_AU1 298 8e-99 86..374 78..349
MpalAPx02 295 2e-97 86..374 87..359
CbrebAPx07 291 2e-97 88..374 2..271
Literature and cross-references CmeAPx01 (CmstAPX / CYME_CMM158C)
Literature REFERENCE 1 Nozaki,H., Takano,H., Misumi,O., Terasawa,K., Matsuzaki,M., Maruyama,S., Nishida,K., Yagisawa,F., Yoshida,Y., Fujiwara,T., Takio,S., Tamura,K., Chung,S.J., Nakamura,S., Kuroiwa,H.,Tanaka,K., Sato,N. and Kuroiwa,T.A .100%-complete sequence reveals unusually simple genomic features in the hot-spring red alga Cyanidioschyzon merolae. BMC Biol. 5, 28 (2007).

REFERENCE 2 Hirooka,S., Misumi,O., Yoshida,M., Mori,T., Nishida,K., Yagisawa,F., Yoshida,Y., Fujiwara,T., Kuroiwa,H. and Kuroiwa,T. Expression of the Cyanidioschyzon merolae stromal ascorbate peroxidase in Arabidopsis thaliana enhances thermotolerance. Plant Cell Rep. 28 (12), 1881-1893 (2009)
DNA ref. GenBank:   NC_010139.1 (369734..368607)
Cluster/Prediction ref. Genebank:   16994978
Protein sequence: CmeAPx01 (CmstAPX / CYME_CMM158C)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   376
PWM (Da):   %s   41338.18  
PI (pH):   %s   9.94
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MRILSCSLLR NGYSGIRSSM NSGQIAFSNA VSFPSLRSIQ VRRISSVSVR SANKVRFSSY FVQREAYRGA AVLRLNTQAP TRRLVTMAID TQTMTSVRND LVEMIKRTKA MPILVRLAWH  DSGDYDARLG TGGANGSIRF NKELQHGGNV GLPGALNLLK PIKEKYPNVG WADLIQYASV LSIEVAGGPK IPFRFGRVDA QSENEVPPEG RLPAGGPPFH KAEGENPNEP APDKEDAAAH  LRRVFYRMGF NDQEIVALSG GHTIGRAYKF RSGFGAGEEG TKYTRAVSGV TKGGSSWTPD WLQFNNMYFK VLMDPNADPE LLKLVTDKAL VEDPEFNKYV KIYATDEAKF FEDYANAHKK 
LSELGSKWDP PGGIPA 

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 13, no intron). No prediction from phytozome.
DNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGCGTATCC TGTCGTGCTC ACTTTTACGT AACGGGTACA GTGGTATCCG TAGCTCGATG AATTCAGGAC AGATTGCTTT TTCAAACGCT GTAAGTTTTC CTTCGTTGCG CTCTATTCAG  GTTAGAAGAA TCAGCAGTGT TTCAGTGCGT TCTGCGAACA AAGTTCGATT CAGTTCTTAT TTTGTGCAAC GTGAAGCGTA CCGCGGCGCG GCAGTTTTGA GACTCAACAC CCAGGCACCG  ACGCGAAGGC TTGTGACCAT GGCAATCGAC ACACAGACGA TGACTTCTGT TCGGAACGAT CTTGTTGAAA TGATCAAGCG TACCAAAGCG ATGCCGATCC TGGTACGCTT GGCGTGGCAC  GACTCGGGAG ACTACGACGC ACGCCTGGGA ACGGGCGGTG CGAACGGCTC TATTCGTTTC AATAAGGAAC TCCAGCATGG CGGCAATGTT GGTCTCCCGG GCGCTCTGAA CCTGTTGAAA  CCAATCAAAG AGAAGTACCC AAACGTAGGA TGGGCTGATC TTATTCAGTA CGCAAGTGTT CTGTCGATCG AGGTTGCAGG CGGGCCCAAG ATTCCGTTCC GTTTCGGCCG TGTCGATGCC  CAGTCGGAGA ATGAGGTGCC ACCAGAGGGT CGACTCCCGG CGGGCGGTCC ACCGTTCCAC AAGGCCGAGG GTGAGAATCC TAACGAGCCC GCGCCCGACA AGGAGGACGC TGCCGCGCAT  TTGCGTAGGG TTTTCTATCG GATGGGTTTC AATGACCAGG AGATCGTTGC ACTGAGCGGT GGCCATACCA TTGGACGCGC GTACAAGTTC CGAAGTGGCT TCGGCGCCGG TGAGGAGGGC  ACCAAGTATA CGCGCGCAGT GAGCGGTGTG ACCAAGGGAG GCAGCTCCTG GACACCGGAC TGGCTCCAGT TCAACAACAT GTACTTCAAG GTGCTCATGG ATCCGAATGC TGATCCGGAG  CTTCTGAAGC TCGTCACAGA CAAGGCTCTC GTCGAAGATC CGGAATTCAA CAAGTACGTG AAGATCTATG CCACCGATGA GGCCAAGTTC TTCGAGGACT ATGCAAATGC CCACAAGAAA 
CTAAGCGAGC TTGGTTCAAA ATGGGATCCG CCTGGTGGAA TTCCGGCATA A 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGCGTATCC TGTCGTGCTC ACTTTTACGT AACGGGTACA GTGGTATCCG TAGCTCGATG AATTCAGGAC AGATTGCTTT TTCAAACGCT GTAAGTTTTC CTTCGTTGCG CTCTATTCAG  GTTAGAAGAA TCAGCAGTGT TTCAGTGCGT TCTGCGAACA AAGTTCGATT CAGTTCTTAT TTTGTGCAAC GTGAAGCGTA CCGCGGCGCG GCAGTTTTGA GACTCAACAC CCAGGCACCG  ACGCGAAGGC TTGTGACCAT GGCAATCGAC ACACAGACGA TGACTTCTGT TCGGAACGAT CTTGTTGAAA TGATCAAGCG TACCAAAGCG ATGCCGATCC TGGTACGCTT GGCGTGGCAC  GACTCGGGAG ACTACGACGC ACGCCTGGGA ACGGGCGGTG CGAACGGCTC TATTCGTTTC AATAAGGAAC TCCAGCATGG CGGCAATGTT GGTCTCCCGG GCGCTCTGAA CCTGTTGAAA  CCAATCAAAG AGAAGTACCC AAACGTAGGA TGGGCTGATC TTATTCAGTA CGCAAGTGTT CTGTCGATCG AGGTTGCAGG CGGGCCCAAG ATTCCGTTCC GTTTCGGCCG TGTCGATGCC  CAGTCGGAGA ATGAGGTGCC ACCAGAGGGT CGACTCCCGG CGGGCGGTCC ACCGTTCCAC AAGGCCGAGG GTGAGAATCC TAACGAGCCC GCGCCCGACA AGGAGGACGC TGCCGCGCAT  TTGCGTAGGG TTTTCTATCG GATGGGTTTC AATGACCAGG AGATCGTTGC ACTGAGCGGT GGCCATACCA TTGGACGCGC GTACAAGTTC CGAAGTGGCT TCGGCGCCGG TGAGGAGGGC  ACCAAGTATA CGCGCGCAGT GAGCGGTGTG ACCAAGGGAG GCAGCTCCTG GACACCGGAC TGGCTCCAGT TCAACAACAT GTACTTCAAG GTGCTCATGG ATCCGAATGC TGATCCGGAG  CTTCTGAAGC TCGTCACAGA CAAGGCTCTC GTCGAAGATC CGGAATTCAA CAAGTACGTG AAGATCTATG CCACCGATGA GGCCAAGTTC TTCGAGGACT ATGCAAATGC CCACAAGAAA 
CTAAGCGAGC TTGGTTCAAA ATGGGATCCG CCTGGTGGAA TTCCGGCATA A 

Retrieve as FASTA