Entry information : AeuRboh01_201684 (Ae201684_9413.1)
Entry ID 2742
Creation 2008-11-17 (Christophe Dunand)
Last sequence changes 2014-04-01 (Catherine Mathe)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2015-10-15 (Christophe Dunand)
Peroxidase information: AeuRboh01_201684 (Ae201684_9413.1)
Name (synonym) AeuRboh01_201684 (Ae201684_9413.1)
Class Respiratory burst oxidase homolog    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Saprolegniaceae Aphanomyces
Organism Aphanomyces euteiches    [TaxId: 100861 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value AeuRboh01_201684
start..stop
S start..stop
NgrFRe01 135 2e-33 254..690 219..674
TvivFRe01 129 2e-31 370..690 524..850
NgrFRe02 108 9e-25 209..688 122..622
NgrFRe03 104 2e-23 258..688 404..855
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 438741..440813 2073  
complement(join(438741..440813))


exon

Literature and cross-references AeuRboh01_201684 (Ae201684_9413.1)
Literature Madoui MA, Gaulin E, Mathé C, San Clemente H, Couloux A, Wincker P, Dumas B. AphanoDB: a genomic resource for Aphanomyces pathogens. BMC Genomics. 2007 Dec 20;8:471
EST ref. GenBank:   CU354299 [Fragment]
Protein sequence: AeuRboh01_201684 (Ae201684_9413.1)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   691 (668)
PWM (Da):   %s   75121.73 (72887.6) Transmb domain:   %s   o207-229i264-281o296-314i335-352o367-389i410-432o (o185-207i242-259o274-292i313-330o345-367i388-410o)
PI (pH):   %s   8.57 (8.57) Peptide Signal:   %s   cut: 23 range:23-690
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MTWSSLLVGL LAASAGVHNA AAQNSSSACA DSSFASQPSV TVGPFGVRSL VVGSSVCIQA SVQSTSLKWI ALSISRSSSM INVPNNNAIV FDTVNNVVQP YVLSDYSTSG VTKQTDASTI  SVKAMSSANG LLSFTFERAL STSSTYDVTI DPTTSTNLLW ATGSSSWPSV HSDRGAVKLQ FATSSSSGAP VPQVAAADND SRVETHTAVI GAIAFAIIIA LGLVASYLIR WRFIHLSTLC  APSRRLHAFS WLTKPFSDIK IGEVIVVLVY IGAMVAVGAS INDRFPSASS NRLTSLISGH LALLSLMFLL LPVAKGEHWE LIFGSSHERI VKLHRWLARI FVIAAIVHLV VNAKNVDVTS  STKYGSQQVV PLYGFIAFVA FVSMSLAAID PIRRKFFEVF YYYHRVASIV GLVFVFLHSV CIQYAMIFPV AIYGLAWLVR FPTFLDRFEA TTEVLCSKTV LVTLPSTPRT AKWVQNSNPC  VFFWVNIPSV SRYEWHPFSG IVTPDGKSIA FCMKALTPGG FVDKVVRQAN QQTKGSLTIY VDGPYGKPTL DVYAYDSLVL LAGGIGVTPM VSMFNRFRQS HSGPSLHLYW VVRTPEELLA 
AETIMFPLPE FVKATFYVSE ATEDGRVQAS SGEYVPYIRG RPNLDECVST TRCYGENVAV LACGPPAFVQ EAQWHAHSCR FDFHKEVFLL * 

Retrieve as FASTA  
Remarks Complete sequence from genomic (no intron) and EST. scaffold21:438741..440813
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGACTTGGT CGAGTCTCCT CGTCGGACTT CTGGCCGCAT CGGCTGGCGT CCACAACGCA GCAGCTCAGA ATTCCAGCTC GGCATGCGCA GATTCGTCCT TCGCGTCGCA ACCGTCGGTC  ACTGTCGGCC CGTTTGGAGT GCGCAGCCTC GTCGTGGGTT CCTCTGTGTG CATCCAAGCA TCCGTGCAGA GCACGAGCTT GAAGTGGATT GCCCTCTCGA TCTCGCGCTC CTCCAGCATG  ATCAATGTGC CAAACAACAA CGCGATCGTC TTCGACACTG TCAACAACGT CGTCCAGCCG TACGTGCTGA GCGACTACTC GACCTCTGGG GTCACCAAGC AGACGGACGC GTCGACCATC  TCTGTCAAAG CTATGAGCTC GGCCAACGGT CTTCTCTCGT TCACGTTTGA ACGGGCGTTG TCCACCTCAT CCACCTATGA CGTGACCATT GACCCAACTA CGTCCACCAA TCTCTTGTGG  GCCACCGGCA GCTCGTCGTG GCCGTCGGTA CATTCGGACC GAGGCGCTGT CAAGCTGCAA TTTGCCACGA GCTCATCCAG CGGCGCTCCT GTTCCTCAAG TCGCCGCTGC CGACAACGAT  TCGCGCGTCG AAACCCACAC GGCCGTCATT GGTGCCATTG CTTTTGCCAT CATCATCGCG TTGGGTCTTG TAGCGTCGTA CCTCATCCGA TGGCGCTTCA TCCACCTCAG CACTCTCTGC  GCTCCATCCC GCCGTCTCCA CGCTTTCTCT TGGCTCACCA AACCTTTCTC CGACATCAAG ATTGGTGAAG TGATCGTTGT CTTGGTGTAC ATTGGTGCCA TGGTCGCCGT GGGTGCGAGC  ATCAACGACC GCTTTCCATC GGCCAGCTCG AACCGACTGA CGTCTCTGAT CTCTGGCCAC TTGGCGTTGC TGTCGCTCAT GTTCCTGTTG CTTCCCGTGG CCAAGGGCGA GCATTGGGAA  CTCATCTTTG GCTCGTCCCA TGAACGCATC GTCAAGTTGC ATCGGTGGCT CGCTCGTATC TTTGTGATCG CCGCGATTGT TCACTTGGTC GTGAATGCCA AGAACGTCGA CGTGACGTCG  TCCACGAAGT ATGGCTCGCA GCAAGTCGTG CCCTTGTATG GTTTCATTGC GTTTGTGGCG TTCGTGTCCA TGTCGTTGGC TGCCATTGAC CCGATCCGCC GCAAGTTCTT CGAAGTGTTC  TACTACTACC ACCGCGTGGC GTCGATCGTC GGCCTTGTGT TCGTGTTTCT CCACAGCGTG TGCATCCAGT ATGCGATGAT CTTCCCCGTT GCGATCTACG GGCTGGCTTG GCTTGTTCGT  TTCCCGACCT TCTTGGACCG CTTTGAGGCG ACGACGGAAG TGCTCTGCTC CAAGACGGTG CTCGTCACGC TGCCATCGAC TCCCCGCACT GCGAAATGGG TCCAGAACTC GAATCCTTGC  GTGTTCTTCT GGGTGAACAT TCCGTCCGTC TCGCGATATG AATGGCATCC ATTCTCGGGC ATTGTCACGC CTGACGGCAA GTCGATTGCG TTCTGCATGA AGGCGCTGAC GCCCGGTGGT  TTCGTCGACA AGGTCGTCCG CCAAGCGAAC CAACAAACCA AGGGCTCGTT GACCATCTAC GTGGACGGTC CTTACGGCAA ACCCACTTTG GACGTGTACG CGTACGACTC GCTCGTGTTG  CTTGCGGGTG GCATCGGCGT CACTCCCATG GTGAGCATGT TCAACCGCTT CCGTCAGTCA CACAGTGGCC CGTCGTTGCA TTTGTACTGG GTTGTCCGAA CTCCTGAAGA GCTCTTGGCG  GCTGAAACGA TCATGTTTCC ATTGCCCGAG TTTGTCAAGG CGACGTTCTA CGTGAGTGAG GCGACGGAAG ACGGACGAGT GCAAGCATCG TCGGGCGAAT ACGTTCCGTA CATCCGTGGG  CGACCTAATC TTGATGAATG CGTCAGCACG ACCCGATGTT ATGGTGAAAA CGTCGCTGTC CTAGCTTGCG GCCCGCCCGC GTTTGTGCAA GAAGCTCAGT GGCATGCGCA TTCGTGCCGC 
TTTGACTTCC ACAAGGAAGT TTTCTTACTG TAG 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGACTTGGT CGAGTCTCCT CGTCGGACTT CTGGCCGCAT CGGCTGGCGT CCACAACGCA GCAGCTCAGA ATTCCAGCTC GGCATGCGCA GATTCGTCCT TCGCGTCGCA ACCGTCGGTC  ACTGTCGGCC CGTTTGGAGT GCGCAGCCTC GTCGTGGGTT CCTCTGTGTG CATCCAAGCA TCCGTGCAGA GCACGAGCTT GAAGTGGATT GCCCTCTCGA TCTCGCGCTC CTCCAGCATG  ATCAATGTGC CAAACAACAA CGCGATCGTC TTCGACACTG TCAACAACGT CGTCCAGCCG TACGTGCTGA GCGACTACTC GACCTCTGGG GTCACCAAGC AGACGGACGC GTCGACCATC  TCTGTCAAAG CTATGAGCTC GGCCAACGGT CTTCTCTCGT TCACGTTTGA ACGGGCGTTG TCCACCTCAT CCACCTATGA CGTGACCATT GACCCAACTA CGTCCACCAA TCTCTTGTGG  GCCACCGGCA GCTCGTCGTG GCCGTCGGTA CATTCGGACC GAGGCGCTGT CAAGCTGCAA TTTGCCACGA GCTCATCCAG CGGCGCTCCT GTTCCTCAAG TCGCCGCTGC CGACAACGAT  TCGCGCGTCG AAACCCACAC GGCCGTCATT GGTGCCATTG CTTTTGCCAT CATCATCGCG TTGGGTCTTG TAGCGTCGTA CCTCATCCGA TGGCGCTTCA TCCACCTCAG CACTCTCTGC  GCTCCATCCC GCCGTCTCCA CGCTTTCTCT TGGCTCACCA AACCTTTCTC CGACATCAAG ATTGGTGAAG TGATCGTTGT CTTGGTGTAC ATTGGTGCCA TGGTCGCCGT GGGTGCGAGC  ATCAACGACC GCTTTCCATC GGCCAGCTCG AACCGACTGA CGTCTCTGAT CTCTGGCCAC TTGGCGTTGC TGTCGCTCAT GTTCCTGTTG CTTCCCGTGG CCAAGGGCGA GCATTGGGAA  CTCATCTTTG GCTCGTCCCA TGAACGCATC GTCAAGTTGC ATCGGTGGCT CGCTCGTATC TTTGTGATCG CCGCGATTGT TCACTTGGTC GTGAATGCCA AGAACGTCGA CGTGACGTCG  TCCACGAAGT ATGGCTCGCA GCAAGTCGTG CCCTTGTATG GTTTCATTGC GTTTGTGGCG TTCGTGTCCA TGTCGTTGGC TGCCATTGAC CCGATCCGCC GCAAGTTCTT CGAAGTGTTC  TACTACTACC ACCGCGTGGC GTCGATCGTC GGCCTTGTGT TCGTGTTTCT CCACAGCGTG TGCATCCAGT ATGCGATGAT CTTCCCCGTT GCGATCTACG GGCTGGCTTG GCTTGTTCGT  TTCCCGACCT TCTTGGACCG CTTTGAGGCG ACGACGGAAG TGCTCTGCTC CAAGACGGTG CTCGTCACGC TGCCATCGAC TCCCCGCACT GCGAAATGGG TCCAGAACTC GAATCCTTGC  GTGTTCTTCT GGGTGAACAT TCCGTCCGTC TCGCGATATG AATGGCATCC ATTCTCGGGC ATTGTCACGC CTGACGGCAA GTCGATTGCG TTCTGCATGA AGGCGCTGAC GCCCGGTGGT  TTCGTCGACA AGGTCGTCCG CCAAGCGAAC CAACAAACCA AGGGCTCGTT GACCATCTAC GTGGACGGTC CTTACGGCAA ACCCACTTTG GACGTGTACG CGTACGACTC GCTCGTGTTG  CTTGCGGGTG GCATCGGCGT CACTCCCATG GTGAGCATGT TCAACCGCTT CCGTCAGTCA CACAGTGGCC CGTCGTTGCA TTTGTACTGG GTTGTCCGAA CTCCTGAAGA GCTCTTGGCG  GCTGAAACGA TCATGTTTCC ATTGCCCGAG TTTGTCAAGG CGACGTTCTA CGTGAGTGAG GCGACGGAAG ACGGACGAGT GCAAGCATCG TCGGGCGAAT ACGTTCCGTA CATCCGTGGG  CGACCTAATC TTGATGAATG CGTCAGCACG ACCCGATGTT ATGGTGAAAA CGTCGCTGTC CTAGCTTGCG GCCCGCCCGC GTTTGTGCAA GAAGCTCAGT GGCATGCGCA TTCGTGCCGC 
TTTGACTTCC ACAAGGAAGT TTTCTTACTG TAG 

Retrieve as FASTA