Entry information : WmPrx04
Entry ID 2770
Creation 2006-01-19 (Christophe Dunand)
Last sequence changes 2016-01-11 (Achraf Jemmat)
Sequence status partial
Reviewer Christophe Dunand
Last annotation changes 2016-01-12 (Christophe Dunand)
Peroxidase information: WmPrx04
Name WmPrx04
Class Class III peroxidase     [Orthogroup: Prx009]*
Taxonomy Eukaryota Viridiplantae Streptophyta Welwitschiaceae Welwitschia
Organism Welwitschia mirabilis    [TaxId: 3377 ]
Cellular localisation N/D
Tissue type strobili (cone)
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value WmPrx04
start..stop
S start..stop
WmPrx03 340 4e-121 1..164 1..164
PgPrx31 214 5e-70 34..164 40..171
GbPrx13 213 6e-70 33..164 26..157
PtaPrx04 214 1e-69 34..164 71..202
Literature and cross-references WmPrx04
Literature dePamphilis,C. et al., Generation of ESTs from early flower buds of Welwitschia mirabilis. Unpublished
EST ref. GenBank:   DT596543.1 [5' end]
Protein sequence: WmPrx04
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   171 (146)
PWM (Da):   %s   18529.32 (15876.9) Transmb domain:   %s   i12-29o
PI (pH):   %s   5.24 (4.90) Peptide Signal:   %s   cut: 26 range:26-171
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MGSKRNKADE ALVLAFVCVF ALAFAEGQMQ PALSVDYYRN TCPQLENIVK ETIVRKQQRN PTTAAGMLRL FFHDCFVDGC DASVLITSWD GHKAERDADI NLSLPGDGFD AVMLAKEAVE 
AQCPGIVSCA DILAIATRDL LTLVGGPFYP VRKGRRDGLI SDAAPSQRQY S 

Retrieve as FASTA  
Remarks Partial sequence from 1 EST. Large 3' end is missing.
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGGAAGCA AGAGAAATAA GGCGGATGAA GCTCTGGTTT TAGCGTTTGT CTGCGTTTTC GCCTTGGCCT TTGCGGAGGG CCAAATGCAA CCCGCGCTGT CCGTGGATTA TTACAGGAAC  ACTTGTCCGC AGCTAGAGAA CATTGTGAAG GAGACTATTG TGCGGAAACA ACAACGGAAT CCGACGACCG CGGCTGGAAT GCTCCGACTC TTCTTTCACG ATTGTTTTGT TGATGGATGT  GACGCATCTG TGTTAATAAC ATCATGGGAC GGTCACAAAG CGGAGAGAGA CGCAGACATA AACCTCTCGT TGCCCGGCGA CGGATTCGAC GCGGTGATGC TTGCCAAGGA AGCTGTAGAA  GCGCAATGCC CTGGCATAGT ATCTTGCGCC GATATCCTCG CCATAGCGAC ACGAGATCTG CTCACCCTAG TCGGCGGCCC TTTCTACCCT GTCCGAAAGG GCCGCCGCGA CGGTCTTATT 
TCAGACGCAG CCCCGAGTCA ACGGCAATAT TCC 

Retrieve as FASTA