Entry information : WmPrx06
Entry ID 2772
Creation 2006-01-19 (Christophe Dunand)
Last sequence changes 2016-01-11 (Achraf Jemmat)
Sequence status partial
Reviewer Christophe Dunand
Last annotation changes 2016-01-12 (Christophe Dunand)
Peroxidase information: WmPrx06
Name WmPrx06
Class Class III peroxidase     [Orthogroup: Prx198]*
Taxonomy Eukaryota Viridiplantae Streptophyta Welwitschiaceae Welwitschia
Organism Welwitschia mirabilis    [TaxId: 3377 ]
Cellular localisation N/D
Tissue type strobili (cone)
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value WmPrx06
start..stop
S start..stop
PabPrx103 287 7e-97 36..227 33..224
GbPrx23 275 3e-91 36..227 30..221
GmonPrx09 216 6e-71 50..223 59..232
SmPrx26-2_6 196 4e-62 47..225 22..200
Literature and cross-references WmPrx06
Literature dePamphilis,C. et al., Generation of ESTs from early flower buds of Welwitschia mirabilis. Unpublished
EST ref. GenBank:   DT604768.1 [Fragment]
Protein sequence: WmPrx06
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   244 (220)
PWM (Da):   %s   26721.36 (24215.2) Transmb domain:   %s   i7-25o
PI (pH):   %s   7.22 (7.30) Peptide Signal:   %s   cut: 25 range:25-244
Sequence
Send to BLAST
Send to Peroxiscan
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FACCSGLWPV VFAVIFVSAS CTFAVKDRRF LQEAHWRSTV GYPQPLPGLD YTFYDDTCPQ AEGIIRSRVN YFVEKNVSNA ARLLRLFYQD CFVKGCDASV LLKGSAYGPW DNSASPEKAL  AVEAFEIIDD IKGNLEKECP QAVSCADIVA LAARDAVLAT EGPYFPMPSG RRDGRDFDTT LKTEQSMPKS TWNVSLLLKS FKSRGLNVMD LVALSGSHTI GKAHCASPLR QTVSARPFDE 
TKSS 

Retrieve as FASTA  
Remarks Partial sequence from 1 EST. Very long PS without ATG and 3' end is missing.
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
TTTGCTTGTT GTTCAGGTCT TTGGCCGGTG GTTTTTGCAG TCATTTTTGT GTCTGCATCA TGCACCTTTG CTGTGAAAGA CCGCCGATTC TTGCAAGAGG CGCATTGGAG ATCAACGGTT  GGATATCCTC AGCCTTTGCC TGGTCTGGAC TATACCTTCT ACGATGATAC ATGTCCTCAA GCAGAGGGCA TCATCAGATC CAGAGTCAAC TATTTTGTTG AGAAGAATGT CTCCAATGCC  GCACGGCTCT TGAGATTGTT CTACCAGGAC TGCTTTGTCA AAGGCTGCGA TGCGTCCGTT TTGCTCAAAG GTTCTGCGTA TGGCCCCTGG GACAACTCTG CTTCACCGGA AAAGGCTCTT  GCCGTCGAGG CCTTTGAGAT TATTGACGAT ATCAAAGGGA ATCTTGAGAA GGAGTGTCCT CAGGCCGTGT CTTGCGCTGA TATAGTTGCT TTGGCCGCCA GAGATGCGGT TCTCGCGACG  GAGGGGCCGT ATTTCCCGAT GCCGTCAGGG CGAAGAGACG GAAGAGATTT TGACACAACG CTGAAGACGG AACAGAGCAT GCCGAAATCG ACATGGAATG TTTCTCTGCT TCTAAAAAGC  TTCAAATCCA GAGGCCTCAA CGTGATGGAC CTAGTTGCGC TCTCTGGATC TCATACGATC GGCAAAGCTC ACTGCGCGTC TCCTCTCAGA CAGACTGTGT CCGCTAGACC CTTTGATGAA 
ACAAAAAGCT CG 

Retrieve as FASTA