Entry information : WmAPx01
Entry ID 2775
Creation 2006-01-19 (Christophe Dunand)
Last sequence changes 2016-01-12 (Achraf Jemmat)
Sequence status partial
Reviewer Christophe Dunand
Last annotation changes 2016-01-12 (Christophe Dunand)
Peroxidase information: WmAPx01
Name WmAPx01
Class Ascorbate peroxidase     [Orthogroup: APx003]*
Taxonomy Eukaryota Viridiplantae Streptophyta Welwitschiaceae Welwitschia
Organism Welwitschia mirabilis    [TaxId: 3377 ]
Cellular localisation Peroxisomal
Tissue type strobili (cone)
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value WmAPx01
start..stop
S start..stop
PtaAPx05 352 6e-125 1..196 33..228
GbAPx03 351 3e-124 1..196 35..230
OsAPx04 338 2e-119 1..196 34..229
CclAPx03 337 7e-119 1..196 34..229
Literature and cross-references WmAPx01
Literature dePamphilis,C. et al., Generation of ESTs from early flower buds of Welwitschia mirabilis. Unpublished
EST ref. GenBank:   DT597288.1 [5' end]
Protein sequence: WmAPx01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   196
PWM (Da):   %s   21523.11  
PI (pH):   %s   8.41
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MLRLAWHDAG TYDAKTKTGG ANGSIRNEDE YSHGSNRGLK IAIDLLEPIK AKIPNITYAD LYQLAGVVAV EITGGPMIDF VPGRKDSLAS PKEGRLPDAS KGAQHLRDIF YRMGLSDKDI 
VALSGGHTLG RAHQERSGFE GAWTKQPLKF DNSYFVELLK GESEGVLQLP TDKCLLEDPA FRPYVELYGK GRRRFF 

Retrieve as FASTA  
Remarks partial sequence from 1 EST. Frame shift and 3' is missing.
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGCTTCGTC TTGCGTGGCA TGACGCTGGA ACGTATGATG CAAAGACAAA GACTGGTGGT GCAAATGGGT CTATCAGAAA CGAGGATGAA TACAGTCATG GATCAAATAG GGGCCTAAAG  ATTGCTATTG ACTTGTTGGA ACCAATCAAG GCAAAAATTC CTAACATCAC CTATGCGGAC CTTTACCAGC TTGCTGGTGT AGTTGCAGTG GAGATAACTG GGGGTCCTAT GATTGATTTT  GTGCCTGGAC GTAAGGATTC ACTGGCATCA CCGAAAGAGG GGAGGCTTCC GGATGCCTCT AAAGGTGCAC AGCACCTGAG GGATATCTTT TATAGGATGG GTTTATCTGA CAAAGATATC  GTTGCTCTTT CTGGAGGACA CACATTGGGG AGAGCACACC AAGAAAGGTC AGGCTTTGAG GGAGCATGGA CTAAGCAGCC ACTCAAATTT GATAACTCAT ACTTTGTAGA GCTTCTCAAA 
GGTGAATCTG AAGGTGTGCT TCAGTTGCCC ACAGACAAAT GCTTGCTGGA AGATCCTGCA TTCCGTCCTT ATGTGGAGCT TTATGGCAAA GGAAGAAGAC GCTTTTTT 

Retrieve as FASTA