Entry information : WmAPx02(Welmir_2059765)
Entry ID 2776
Creation 2007-11-14 (Christophe Dunand)
Last sequence changes 2014-12-03 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2020-10-20 (Christophe Dunand)
Peroxidase information: WmAPx02(Welmir_2059765)
Name WmAPx02(Welmir_2059765)
Class Ascorbate peroxidase    [Orthogroup: APx001]
Taxonomy Eukaryota Viridiplantae Streptophyta Welwitschiaceae Welwitschia
Organism Welwitschia mirabilis    [TaxId: 3377 ]
Cellular localisation N/D
Tissue types Microsporophylls
strobili (cone)
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value WmAPx02
start..stop
S start..stop
WmAPx03 462 6e-168 1..251 1..251
EsinAPx06 447 4e-162 6..251 1..246
PabAPx204 437 4e-157 1..251 59..307
PpAPx01 434 1e-156 1..251 1..249
Literature and cross-references WmAPx02(Welmir_2059765)
Literature dePamphilis,C., Carlson,J., Ma,H., Soltis,D., Soltis,P., Oppenheimer,D., Frohlich,M., Doyle,J., Tanksley,S., Webb,M., Leebens-Mack,J., Landherr,L., Ilut,D. and Wall,K. Generation of ESTs from young male strobilus of Welwitschia.
EST ref. GenBank:   DT604524
Protein sequence: WmAPx02(Welmir_2059765)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   251
PWM (Da):   %s   27565.87  
PI (pH):   %s   6.1
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MAKVYPPVSE EYKVAVDKCR RKLRALIAEK NCAPIMVRLA WHSAGTFDVK SRTGGPFGTL RFAGEQAHGA NNGLDIAVKL LQPIKDQFPI ISYADLYQLA GVVAVEVTGG PDIPFHPGRQ  DKQENEVPEE GRLPDATKGS DHLRDIFYRM GMNDQEIVAL SGAHTLGRCH KERSGFEGPW TSNPLHFDNS YFKELTSGEK SGLLQLPSDK ALVSDPAFAP FVKKYAEDED AFFEDYAAAH 
LKLSELGFAD A 

Retrieve as FASTA  
Remarks Complete sequence from 6 ESTs (DT576079, DT604524, DT589208, CK762519, CK753992, CK765730) and RNA seq.
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCAAAGG TGTATCCGCC AGTGTCCGAG GAGTACAAGG TCGCTGTTGA CAAATGCCGC CGAAAGCTCC GTGCGCTCAT CGCGGAGAAG AACTGCGCTC CTATCATGGT CCGCCTTGCA  TGGCACAGCG CTGGCACCTT TGATGTTAAA TCGAGGACCG GAGGGCCCTT CGGAACCCTA AGATTTGCCG GTGAGCAAGC TCATGGTGCC AACAATGGCT TGGACATTGC TGTAAAGCTT  CTGCAACCTA TCAAGGATCA ATTTCCGATC ATTTCTTATG CCGATTTATA TCAGCTTGCT GGTGTCGTAG CCGTTGAGGT TACCGGAGGT CCTGATATTC CTTTCCATCC CGGCAGACAG  GACAAGCAAG AGAATGAGGT GCCAGAAGAA GGTCGACTTC CTGATGCCAC AAAGGGATCC GATCACCTCA GAGACATCTT TTACCGAATG GGAATGAATG ACCAGGAGAT CGTTGCTCTT  TCCGGAGCCC ACACCCTTGG ACGCTGCCAC AAGGAGAGAT CAGGATTCGA AGGGCCATGG ACTTCCAATC CTCTTCATTT CGACAATTCT TATTTCAAGG AACTCACGAG CGGAGAGAAG  TCAGGCTTGC TCCAACTGCC CTCTGACAAG GCATTGGTAT CTGATCCTGC ATTCGCACCC TTCGTTAAGA AATATGCCGA GGATGAGGAT GCTTTCTTTG AGGATTACGC CGCAGCCCAT 
TTAAAGCTTT CAGAACTGGG GTTTGCTGAT GCA 

Retrieve as FASTA