Entry information : VvPrx01 (GSVIVG01005386001)
Entry ID 287
Creation 2009-02-24 (Christophe Dunand)
Last sequence changes 2012-01-05 (Qiang Li)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-01-05 (Qiang Li)
Peroxidase information: VvPrx01 (GSVIVG01005386001)
Name (synonym) VvPrx01 (GSVIVG01005386001)
Class Class III peroxidase    [Orthogroup: Prx016]
Taxonomy Eukaryota Viridiplantae Streptophyta Vitaceae Vitis
Organism Vitis vinifera (Grape)    [TaxId: 29760 ]
Cellular localisation N/D
Tissue types Seedlings
Stems
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value VvPrx01
start..stop
S start..stop
CroPrx21 528 0 6..316 2..312
PtPrx44 520 0 1..316 1..317
MePrx02 513 0 1..316 1..316
PpePrx30 513 0 1..316 1..318
Literature and cross-references VvPrx01 (GSVIVG01005386001)
Literature Goes da Silva,F., Iandolino,A., Lim,H., Baek,J., Leslie,A., Xu,J.,Jones,K. and Cook,D. Expressed sequence tags from Vitis vinifera 'Cabernet sauvignon'berries at various developmental stages.
Protein ref. GenBank:   CU459546 GenPept:   CAO23261
DNA ref. GenBank:   CAAP02004114.1 (18492..19839)   AM474351 (22931..24281) [Sequencing error] Phytozome 11:   chrUn (40061749..40063337)
Cluster/Prediction ref. UniGene:   Vvi.14645
Protein sequence: VvPrx01 (GSVIVG01005386001)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   316 (294)
PWM (Da):   %s   33780.29 (31642.1)  
PI (pH):   %s   9.12 (9.12) Peptide Signal:   %s   cut: 23 range:23-316
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MAAIAALLSS LLIFLASPLG NALSSNYYDK TCPDVESTVT NAVRQAVMAD KKVAAALLRM HFHDCFIRGC DASVLLNSVN KNTAEKDGPA NGSLHAFFVI DNAKKALEAL CPGVVSCADI  LALAARDAVV LVGGPTWEVP KGRKDGRISR ASETSQLPSP TFNISQLKQS FSQRGLSLDD LVALSGGHTL GFSHCSSFQS RIHNFNATHD IDPTMHPSLA ASLRSVCPKK NNVKNAGATM 
DPSPTTFDNT YYKLILQGRS LFSSDEALLT FPKTKNLVSK FATSKETFSK AFVNSIIKMS SITGGQEIRK DCRVVN 

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 4, 3 introns) and 12 ESTs. Cultivar="Pinot Noir" and cultivar="PN40024". Incorrect prediction from phytozome (5' end is missing).
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCTGCCA TTGCTGCATT GTTGAGCTCA CTTCTCATTT TTTTGGCCTC TCCACTAGGA AATGCACTGA GTTCGAACTA CTACGACAAG ACATGCCCAG ATGTTGAGTC AACCGTCACA  AATGCTGTCA GGCAGGCAGT GATGGCGGAC AAAAAAGTCG CTGCTGCGCT GCTCCGAATG CATTTCCATG ACTGCTTCAT AAGGGTATGC ACAAAATAGC AGTTTCTACA TCAGAGTGAT  TTTGTGGTCA TTTCCTTCAA ACTGTTTTGA CCTGCTTATT TCCCTTAATT TCGCAGGGCT GTGATGCTTC TGTCTTGTTG AATTCGGTAA ACAAAAACAC TGCAGAAAAA GACGGGCCAG  CAAATGGTTC TTTGCATGCA TTTTTTGTCA TTGACAACGC AAAGAAAGCA TTAGAAGCAT TGTGCCCTGG AGTGGTCTCC TGTGCTGATA TTTTGGCTCT AGCTGCAAGG GATGCAGTTG  TGCTAGTAAG TAATAGACTA ACAAGTAATA CAAGTAAAAT TTTGGGAAAG TAGAAATAAC TAAAATCTTG CTCCCATGCA ACCACAAAAA TTTTTTTGAC CCCATACAAT ACCAAGGAAC  ACCGACTGTT TTTACAACTA AAACGACCAA TAATAATGAG GGAAAGTAAA CTCTTAACAT GATCTACTTG AGCTATCTGA GGATATTTAA TGCATCCTAC AGGTAGGAGG TCCAACTTGG  GAAGTTCCCA AAGGAAGAAA AGATGGAAGA ATATCAAGAG CTAGTGAAAC CAGTCAGTTG CCATCTCCAA CCTTCAACAT ATCTCAACTA AAACAAAGCT TCTCTCAAAG AGGTCTATCC  CTGGATGACC TAGTGGCTCT TTCAGGTAAA CAAGCAACCG CTCATCTGGC CTTGTTGTGT CATTTTCTCC TACTTACATC ACAAAAATGA CAATGGTAGC CTTCACCCAT CTGTAGGAGG  GCATACTCTC GGATTTTCCC ACTGTTCATC CTTCCAGAGC AGGATTCACA ACTTCAATGC CACACATGAC ATCGACCCGA CGATGCATCC ATCCCTTGCA GCGAGCTTAA GGAGTGTTTG  TCCAAAGAAG AATAATGTCA AGAATGCTGG AGCCACCATG GACCCTTCTC CAACAACTTT TGACAACACT TACTACAAGC TAATTCTCCA GGGGAGAAGC CTGTTTTCCT CTGATGAAGC  TTTGCTCACT TTTCCAAAGA CCAAAAATTT GGTTTCTAAG TTTGCAACCT CAAAAGAAAC TTTCTCAAAG GCATTTGTTA ACTCTATCAT CAAGATGAGC AGCATTACTG GTGGACAAGA 
GATCAGGAAG GACTGCAGGG TGGTAAATTA A 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCTGCCA TTGCTGCATT GTTGAGCTCA CTTCTCATTT TTTTGGCCTC TCCACTAGGA AATGCACTGA GTTCGAACTA CTACGACAAG ACATGCCCAG ATGTTGAGTC AACCGTCACA  AATGCTGTCA GGCAGGCAGT GATGGCGGAC AAAAAAGTCG CTGCTGCGCT GCTCCGAATG CATTTCCATG ACTGCTTCAT AAGGGGCTGT GATGCTTCTG TCTTGTTGAA TTCGGTAAAC  AAAAACACTG CAGAAAAAGA CGGGCCAGCA AATGGTTCTT TGCATGCATT TTTTGTCATT GACAACGCAA AGAAAGCATT AGAAGCATTG TGCCCTGGAG TGGTCTCCTG TGCTGATATT  TTGGCTCTAG CTGCAAGGGA TGCAGTTGTG CTAGTAGGAG GTCCAACTTG GGAAGTTCCC AAAGGAAGAA AAGATGGAAG AATATCAAGA GCTAGTGAAA CCAGTCAGTT GCCATCTCCA  ACCTTCAACA TATCTCAACT AAAACAAAGC TTCTCTCAAA GAGGTCTATC CCTGGATGAC CTAGTGGCTC TTTCAGGAGG GCATACTCTC GGATTTTCCC ACTGTTCATC CTTCCAGAGC  AGGATTCACA ACTTCAATGC CACACATGAC ATCGACCCGA CGATGCATCC ATCCCTTGCA GCGAGCTTAA GGAGTGTTTG TCCAAAGAAG AATAATGTCA AGAATGCTGG AGCCACCATG  GACCCTTCTC CAACAACTTT TGACAACACT TACTACAAGC TAATTCTCCA GGGGAGAAGC CTGTTTTCCT CTGATGAAGC TTTGCTCACT TTTCCAAAGA CCAAAAATTT GGTTTCTAAG 
TTTGCAACCT CAAAAGAAAC TTTCTCAAAG GCATTTGTTA ACTCTATCAT CAAGATGAGC AGCATTACTG GTGGACAAGA GATCAGGAAG GACTGCAGGG TGGTAAATTA A 

Retrieve as FASTA