Entry information : ThPrx12
Entry ID 2907
Creation 2006-03-22 (Christophe Dunand)
Last sequence changes 2015-11-12 (Christophe Dunand)
Sequence status complete
Reviewer Achraf Jemmat
Last annotation changes 2015-11-12 (Achraf Jemmat)
Peroxidase information: ThPrx12
Name ThPrx12
Class Class III peroxidase    [Orthogroup: Prx003]
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Thellungiella
Organism Thellungiella halophila (Eutrema halophilum)    [TaxId: 98038 ]
Cellular localisation N/D
Tissue type Leaves
Inducers Cold stress
Drought
Repressor N/D
Best BLASTp hits
Perox score E-value ThPrx12
start..stop
S start..stop
TsPrx12 749 0 23..385 1..363
BrPrx12-1Ab_other 684 0 23..385 1..362
AhalPrx49 683 0 23..385 1..358
AlyPrx12 675 0 23..385 1..359
Literature and cross-references ThPrx12
Literature Taji,T., Sakurai,T., Mochida,K., Ishiwata,A., Kurotani,A., Totoki,Y., Toyoda,A., Sakaki,Y., Seki,M., Ono,H., Sakata,Y., Tanaka,S. and Shinozaki,K. BMC Plant Biol. 8, 115 (2008).
EST ref. GenBank:   AK352619.1
Protein sequence: ThPrx12
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   385
PWM (Da):   %s   42426.95 Transmb domain:   %s   i26-48o
PI (pH):   %s   9.58
Sequence
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Send to Peroxiscan
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MNNKKHRKRK SFVIERPTRS EKMAKAYSAR VLTFLILISL MVVALNLLST VEAQNKKKPR RGDVPLVKGL SWNFYQKACP KVEKIIRKEL KKVFKRDIGL AAAILRIHFH DCFVQGCEAS  VLLAGSASGP GEQSSIPNLT LRQAAFVVIN NLRAIVHKRC GQVVSCSDIL ALAARDSVVL SGGPDYAVPL GRRDSLAFAS QDTTLANLPP PFANASQLIT DFESRNLNIT DLVALSGGHT  IGIAHCPSFT DRLYPNQDPT MNKFFANSLK RTCPTANSSN TQVNDIRSPD VFDNKYYVDL MNRQGLFTSD QDLFVDKRTR GIVESFAIDE DLFFDHFTVA MIKMGQMSVL TGSQGEIRSN 
CSARNVDSFM SVLEAGIVEE ALSMI 

Retrieve as FASTA  
Remarks Complete sequence from 1 mRNA
CDS
Send to BLAST
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ATGAACAACA AGAAGCACAG AAAGAGAAAA AGCTTTGTAA TTGAAAGACC AACAAGATCA GAAAAAATGG CTAAGGCTTA TTCAGCACGT GTCCTCACGT TTCTGATATT GATCTCGTTA  ATGGTGGTGG CACTGAATCT TCTGTCAACG GTAGAAGCAC AGAATAAGAA AAAGCCGAGG AGAGGCGATG TTCCTCTAGT GAAAGGTCTC TCATGGAACT TTTACCAGAA AGCATGTCCC  AAAGTCGAAA AAATCATCAG AAAGGAGCTC AAGAAAGTCT TCAAGAGGGA TATTGGTTTA GCCGCAGCCA TCCTCCGTAT ACATTTCCAT GACTGCTTCG TTCAGGGATG TGAAGCATCA  GTGCTGCTAG CTGGATCAGC GAGTGGACCA GGAGAACAAT CATCGATCCC GAATCTGACA CTACGTCAAG CCGCCTTTGT CGTCATCAAT AACCTCCGTG CTATCGTCCA CAAGCGTTGC  GGTCAAGTCG TCTCTTGCTC TGACATCCTC GCTCTAGCCG CTCGTGACTC CGTCGTCCTT TCAGGAGGGC CAGACTATGC TGTGCCACTT GGCCGACGAG ACTCACTAGC GTTCGCAAGC  CAGGACACGA CGTTAGCTAA CTTACCGCCA CCATTCGCTA ACGCGAGCCA GCTCATCACC GACTTTGAAA GTAGAAACCT CAACATCACC GACTTAGTTG CGCTTTCCGG TGGTCACACC  ATCGGAATTG CGCATTGTCC GTCTTTTACG GACCGGCTCT ACCCGAACCA AGACCCAACC ATGAACAAGT TCTTCGCCAA CAGCCTCAAA CGCACGTGCC CCACAGCGAA CTCAAGCAAC  ACGCAAGTGA ACGACATAAG GAGCCCTGAC GTGTTCGACA ACAAGTACTA TGTTGATCTC ATGAACCGAC AAGGGCTTTT CACGTCCGAC CAGGACCTGT TCGTGGACAA GAGGACACGT  GGTATTGTGG AGAGCTTTGC GATCGATGAG GATCTGTTTT TTGATCATTT CACGGTGGCG ATGATCAAGA TGGGTCAGAT GAGTGTCTTG ACGGGGTCAC AAGGAGAGAT TCGCTCAAAC 
TGCTCAGCAA GAAACGTTGA TAGTTTCATG TCTGTTTTGG AAGCAGGAAT AGTCGAGGAA GCTCTTTCCA TGATCTAA 

Retrieve as FASTA