Entry information : BoPrx22-1Ca_other
Entry ID 3010
Creation 2009-08-10 (Christophe Dunand)
Last sequence changes 2009-08-10 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2012-05-10 (Christophe Dunand)
Peroxidase information: BoPrx22-1Ca_other
Name BoPrx22-1Ca_other
Class Class III peroxidase     [Orthogroup: Prx040]*
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Brassica
Organism Brassica oleracea (Cauliflower)    [TaxId: 3712 ]
Cellular localisation N/D
Tissue type Etiolated seedlings
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BoPrx22-1Ca_other
start..stop
S start..stop
CagraPrx11 335 2e-116 1..261 1..312
BrPrx22-1Aa_other 296 1e-100 1..146 1..146
BrPrx22-1Aa_other 211 1e-67 160..261 249..350
AlyPrx22 271 6e-91 1..146 1..146
AlyPrx22 162 3e-48 160..261 249..349
TsPrx23 271 7e-91 1..146 1..146
TsPrx23 152 1e-44 160..261 249..350
Literature and cross-references BoPrx22-1Ca_other
DNA ref. GenBank:   BH973261.1 [5' end]
EST ref. GenBank:   AM061863.1 [5' end]   AM061235.1 [3' end]
Protein sequence: BoPrx22-1Ca_other
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   261 (232)
PWM (Da):   %s   27269.49 (24259.1)  
PI (pH):   %s   6.11 (5.31) Peptide Signal:   %s   cut: 30 range:30-261
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MRFSHSFSCS AMGALILGCL LLQASNSNAQ LRPDFYFRTC RQVFDIIGNV IVDELSSDPR IAASLLRLHF HDCFVNGCDA SILLDNSTSF RTEKDAAPNA NSARGFNVID RMKDEIELAC  PRTVSCADIL TIASxxSVLL SGGPWWxxxx xxxxxxxxxN FDPVTPDGFD QQYYTNLRQG KGLIQSDQEL FSTPRADTIP LVEQYSNNRF VFFQAFAEAM IRMGNLKPLT GTQGEIRQNC 
RVVNSRIRSV KNEDHGVVSS I 

Retrieve as FASTA  
Remarks Partial sequence from GSS and 3 ESTs (AM059373, AM061235). No overlap.