Entry information : BoPrx12_other
Entry ID 3013
Creation 2009-09-10 (Christophe Dunand)
Last sequence changes 2009-09-10 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2009-09-10 (Christophe Dunand)
Peroxidase information: BoPrx12_other
Name BoPrx12_other
Class Class III peroxidase    [Orthogroup: Prx003]
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Brassica
Organism Brassica oleracea (Cauliflower)    [TaxId: 3712 ]
Cellular localisation N/D
Tissue types Etiolated seedlings
Flower buds
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BoPrx12_other
start..stop
S start..stop
BrPrx12-1Ab_other 679 0 1..332 1..332
BnPrx12_other 675 0 1..332 1..332
TsPrx12 635 0 1..332 1..333
ThPrx12 634 0 1..332 23..355
Literature and cross-references BoPrx12_other
Literature Barker,G.C., Sharp,A., Durkin,J., Naylor,R., Edwards,R., Gjetvaj,B., Lydiate,D. and King,G. Analyis of EST libraries of Brassica oleracea prepared from differing stages of development, Unpublished (2005)
DNA ref. GenBank:   BH501904.1 [5' end]   BH672653.1 [3' end]   BZ474708.1 [Fragment]
Protein sequence: BoPrx12_other
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   332 (301)
PWM (Da):   %s   36310.86 (32969.9) Transmb domain:   %s   o10-29i
PI (pH):   %s   9.47 (9.28) Peptide Signal:   %s   cut: 32 range:32-332
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MGKDLSKRVL TFLILISLLA VAMNLLSTVE AQNKKKPRRD VPLVKGLSWS FYQKACPKVE SIIRKELKKV FKRDIGLAAA ILRIHFHDCF VQGCEASVLL DGSASGPGEQ SSIPNLTLRQ  AAFVVINNLR ALVHKQCGQV VSCSDILALA ARDSVVLSGG PDYAVPLGRR DALAFASQNT TLNNLPPPFA NASQLIADFA NRNLNITDLV ALSGGHTIGI AHCPSFTDRL YPNQDPTMNK 
SFANNLKRTC PTANSSNTQV NDIRSPDVFD NKYYVDLMNR QGLFTSDQDL FTDKRTRGIV ESFAIDQKLF FDHFVVGMIK MGQMSVLTGS QG 

Retrieve as FASTA  
Remarks Complete sequence from 2 ESTs (AM060215 and AM396030) and GSS (BZ474718, BH501904, BZ474708, BH672653) (intron 1 and 2). Cultivar="Marathon", variety="italica" and cultivar="A12DHd", variety="alboglabra".