Entry information : BoPrx45-1Ca_other
Entry ID 3015
Creation 2006-09-01 (Christophe Dunand)
Last sequence changes 2006-09-01 (Christophe Dunand)
Sequence status partial
Reviewer Filippo Passardi
Last annotation changes 2012-05-10 (Christophe Dunand)
Peroxidase information: BoPrx45-1Ca_other
Name BoPrx45-1Ca_other
Class Class III peroxidase     [Orthogroup: Prx020]*
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Brassica
Organism Brassica oleracea (Cauliflower)    [TaxId: 3712 ]
Cellular localisation N/D
Tissue type Etiolated seedlings
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BoPrx45-1Ca_other
start..stop
S start..stop
AtrPrx46 290 3e-99 1..228 24..315
MePrx133 263 1e-88 1..228 27..324
EcamPrx67 263 1e-88 1..228 28..325
EguPrx68 262 3e-88 1..228 28..325
Literature and cross-references BoPrx45-1Ca_other
Literature Barker,G.C., Sharp,A., Durkin,J., Naylor,R., Edwards,R., Gjetvaj,B., Lydiate,D. and King,G. Analyis of EST libraries of Brassica oleracea prepared from differing stages of development, Unpublished (2005)
DNA ref. GenBank:   BH579830   BZ472215
Protein sequence: BoPrx45-1Ca_other
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   228
PWM (Da):   %s   24527.49  
PI (pH):   %s   9.95
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
FYQRSCPTLE NIVRNAVRQK FQQTFVTAPA TLRLFFHDCF VRGCDASILL ASPSERDHPD DMSLAGDGFD TVVKAKQAVD RDPNCRNKVS CADILALATR EVVVLxxxxx xxxSPKTRID 
PSLNRGYAFQ LRQMCPIRVD PRIAINMDPT SPRTFDNAYF KNLQQGRGLF TSDQVLFTDR RSRATVNMFA NSEGAFRQAF ISAITKLGRV GVKTGNAGEI RRDCSRVN 

Retrieve as FASTA  
Remarks Partial sequence from 1 EST and 2 GSS (BH579830, BZ472215). No overlap between the two fragments but based on the homology with AtPrx45, the two fragments has been considered as coming from the same sequence.