Entry information : BoPrx06_other
Entry ID 3016
Creation 2008-12-01 (Christophe Dunand)
Last sequence changes 2008-12-01 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2010-05-17 (Christophe Dunand)
Peroxidase information: BoPrx06_other
Name BoPrx06_other
Class Class III peroxidase    [Orthogroup: Prx002]
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Brassica
Organism Brassica oleracea (Cauliflower)    [TaxId: 3712 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BoPrx06_other
start..stop
S start..stop
BrPrx06-1Aa_other 687 0 1..331 1..331
TsPrx06 592 0 1..331 1..328
AlyPrx06 580 0 1..331 1..326
AhalPrx53 578 0 8..331 7..326
Literature and cross-references BoPrx06_other
Literature Ayele,M., Haas,B.J., Kumar,N., Wu,H., Xiao,Y., Van Aken,S., Utterback,T.R., Wortman,J.R., White,O.R. and Town,C.D. Whole genome shotgun sequencing of Brassica oleracea and its application to gene discovery and annotation in Arabidopsis, Genome Res. 15 (4), 487-495 (2005)
DNA ref. GenBank:   EU579454.1 (22200..23182)
Protein sequence: BoPrx06_other
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   331 (310)
PWM (Da):   %s   36667.86 (34284.6)  
PI (pH):   %s   5.65 (5.40) Peptide Signal:   %s   cut: 22 range:22-331
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MNSCGLRCLF ILLSFPYLLQ ADLSSDYYSK TCPDFDQTLV QVVTDKQIAA PTTAAGTLRL FFHDCMVDGC DASILVASTS GKTSERDADI NHSLPGDAFD LITRIKTALE LKCPNVVSCS  DILVGATRSL VKMVGGPRIN VKYGRKDSLD SDMNRVEGKL ARPNMTMDHI ISIFGSAGLT VQEMVALVGS HTIGFSHCKE FASRIFNSNA EHSADFCPEG MNAKYAAELR KLCANYTKDA 
EMSAFNDVFT PGKFDNMYYK NLQHGYGLLE SDQAIAFDNR TRPFVDLYAA NETAFFDAFA KAMEKFSEQR VKTELNGDVR RRCDQYNDYR G 

Retrieve as FASTA  
Remarks Complete sequence from genomic (no intron), 2 GSS (BH248212 and BH660326). No EST.