Entry information : BoPrx07-2Ca_other
Entry ID 3017
Creation 2006-09-01 (Christophe Dunand)
Last sequence changes 2006-09-01 (Christophe Dunand)
Sequence status partial
Reviewer Filippo Passardi
Last annotation changes 2012-05-10 (Christophe Dunand)
Peroxidase information: BoPrx07-2Ca_other
Name BoPrx07-2Ca_other
Class Class III peroxidase     [Orthogroup: Prx031]*
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Brassica
Organism Brassica oleracea (Cauliflower)    [TaxId: 3712 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BoPrx07-2Ca_other
start..stop
S start..stop
BrPrx07-1Aa_other 608 0 7..307 51..351
BrPrx07-1Ab_other 557 0 9..307 49..347
BrPrx07-1Ac_other 555 0 9..307 44..342
AhalPrx54 542 0 9..307 9..307
Literature and cross-references BoPrx07-2Ca_other
Literature Ayele,M., Haas,B.J., Kumar,N., Wu,H., Xiao,Y., Van Aken,S., Utterback,T.R., Wortman,J.R., White,O.R. and Town,C.D. Whole genome shotgun sequencing of Brassica oleracea and its application to gene discovery and annotation in Arabidopsis, Genome Res. 15 (4), 487-495 (2005)
DNA ref. GenBank:   BZ461371
Protein sequence: BoPrx07-2Ca_other
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   306
PWM (Da):   %s   33861.26  
PI (pH):   %s   7.98
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
VLVSFGHQLS LSYYDRICPD FEKIVATKVR EWTKKDSSLG PALLRLLFHD CGVTGCDASV LLDHEGSERR SPASKTLRGF ELIDDIKSEI EKACPGLVSC ADILTAASRD ATFQLGGPYW  PNAYGRRDST DSYARDVEKV PSGRRDITGL LETFQSYGLN VLDLVVLSGA HTIGKAYCGT IQSRLYNFNA TYGTDPSIES KYADFLRRKC RVASETVYLD AETPVKFDNQ YYINLQKNMG 
VLTTDQELVK DPRTAPLVKA FAEQPPHMFR *QFAVSMAKL VNVGVITGEE RVGVIRKVCS KSNSRPY 

Retrieve as FASTA  
Remarks Partial sequence from 4 GSS (BZ461371, BH447521, BH946549, CC959878), no EST and only intron 1. Short PS is missing and early stop codon.