Entry information : BoPrx52-1Cb_other
Entry ID 3020
Creation 2009-08-12 (Christophe Dunand)
Last sequence changes 2009-08-12 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-05-10 (Christophe Dunand)
Peroxidase information: BoPrx52-1Cb_other
Name BoPrx52-1Cb_other
Class Class III peroxidase    [Orthogroup: Prx006]
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Brassica
Organism Brassica oleracea (Cauliflower)    [TaxId: 3712 ]
Cellular localisation N/D
Tissue type Etiolated seedlings
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BoPrx52-1Cb_other
start..stop
S start..stop
BnPrx52-2_other 654 0 1..325 1..325
BrPrx52-1Ab_other 650 0 1..325 1..325
BstrPrx47 593 0 1..325 1..324
TsPrx52 585 0 1..325 1..324
Literature and cross-references BoPrx52-1Cb_other
Literature Barker,G.C., Sharp,A., Durkin,J., Naylor,R., Edwards,R., Gjetvaj,B., Lydiate,D. and King,G. Analyis of EST libraries of Brassica oleracea prepared from differing stages of development, Unpublished (2005)
DNA ref. GenBank:   BZ449465.1 [5' end]   BZ503392.1 [3' end]   FI684804.1 [Fragment]   FI761956.1 [Fragment]
EST ref. GenBank:   AM058723.1
Protein sequence: BoPrx52-1Cb_other
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   325 (305)
PWM (Da):   %s   34057.9 (31945.7)  
PI (pH):   %s   7.98 (7.98) Peptide Signal:   %s   cut: 21 range:21-325
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MASNNLFIAI LAIVVTLSLQ GDNNNVVQAQ LTTNFYSTSC PNLLSTVRST VKSAVDSQPR TGASILRLFF HDCFVNGCDG SILLDDTSSF TGEQNANPNR NSARGFNVID NIKTAVEAAC  PGVVSCADIL AIAARDSVVL LGGPNWNVKV GRRDARTASQ AAANSNIPAP TSSLSQLISS FSAVGLSTRD MVALSGAHTI GQSRCTNFRT RVYNETNINA AFATLRQRSC PRAAGSGDGN 
LAPLDVNSAN SFDNSYFKNL VAQRGLLHSD QELFNGGSTD SIVTGYSNNP ASFSSDFTAA MIKMGDISPL TGSSGEIRKV CGRTN 

Retrieve as FASTA  
Remarks Partial sequence from 1 EST and 10 GSS (BZ503392, BZ449459, BH648547, BH445570...).