Entry information : BoPrx43_other
Entry ID 3025
Creation 2006-05-05 (Christophe Dunand)
Last sequence changes 2006-05-05 (Christophe Dunand)
Sequence status complete
Reviewer Filippo Passardi
Last annotation changes 2008-01-04 (Christophe Dunand)
Peroxidase information: BoPrx43_other
Name BoPrx43_other
Class Class III peroxidase    [Orthogroup: Prx016]
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Brassica
Organism Brassica oleracea (Cauliflower)    [TaxId: 3712 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BoPrx43_other
start..stop
S start..stop
BrPrx43-1Aa_other 653 0 1..326 1..326
BnPrx43_other 650 0 1..326 1..326
TsPrx43 608 0 1..326 1..326
CagraPrx52 602 0 1..326 1..326
Literature and cross-references BoPrx43_other
Literature Delehaunty,K., Fewell,G., Fulton,L., McCombie,W.R., Miner,T., Nash ,W., Rabinowicz,P.D. and Wilson,R.K. Whole genome shotgun reads from Brassica oleracea Unpublished (2002)
DNA ref. GenBank:   BZ075351 [5' end]   BH445548 [3' end]
Protein sequence: BoPrx43_other
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   326
PWM (Da):   %s   35148.1 Transmb domain:   %s   i7-24o
PI (pH):   %s   6.04
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MVWTKAKVNL ALSLVIVFIG ISVADLKVGF YSNTCPQAES IVKRVVSGAS LSDPNLPAIL LRLHFHDCFV EGCDGSILVD NGAISEKFAF GHEGVRGFEI IEAAKAELEA ACPGVVSCAD  IVALAARDAI SLANGPAYEV PTGRRDGRVS NLSLAKDMPD VSDSIEILKD KFMRKGLHAK ELVLLSAAHT IGTTACFFMT KRLYNFLPGG QPDPTINPVF LPELTTQCPQ NGDINTRIPM 
DRSSERLFDQ QILQNIKDGF AVLQTDAGLY EDVATRQIVN SYVGLLNPLF GPSFESDFVK AMVKMGKINL KTGSNGEIRR VCSAFN 

Retrieve as FASTA  
Remarks Complete sequence from GSS. BZ075351, BH445537 (exons 1, 2 and 3), BH445548 (exon 4). No overlap of the intron 3, assembly based on the homology with Arabidopsis.