Entry information : BnPrx52-1_other
Entry ID 3036
Creation 2007-01-01 (Christophe Dunand)
Last sequence changes 2007-01-01 (Christophe Dunand)
Sequence status partial
Reviewer reviewer name not stored
Last annotation changes 2009-08-14 (Christophe Dunand)
Peroxidase information: BnPrx52-1_other
Name BnPrx52-1_other
Class Class III peroxidase     [Orthogroup: Prx008]*
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Brassica
Organism Brassica napus (oilseed rape)    [TaxId: 3708 ]
Cellular localisation N/D
Tissue type Seeds
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BnPrx52-1_other
start..stop
S start..stop
BrPrx52-1Aa_other 365 3e-129 1..204 1..204
BstrPrx47 363 1e-128 1..204 1..204
BoPrx52-1Cb_other 351 8e-124 1..204 1..205
BnPrx52-2_other 351 9e-124 1..204 1..205
Literature and cross-references BnPrx52-1_other
Literature Selvaraj,G., Kurylo,E., Hirji,R. and Datla,R. Transcriptome analysis of early seed development in canola, Unpublished (2004)
DNA ref. GenBank:   DU105414.1 [5' end]
EST ref. AphanoDB:   CN727046.1 [5' end]
Protein sequence: BnPrx52-1_other
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   204 (179)
PWM (Da):   %s   21211.72 (18458.2)  
PI (pH):   %s   8.78 (8.78) Peptide Signal:   %s   cut: 26 range:26-204
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MASNQFVSIL VLVVTLLLQR DNNNAVKAQL TTNFYSTSCP NLLSTVKSGV KSAVSSQPRM GASILRLFFH DCFGNGCNGS ILLDDTSSFT GEQNAGPNRN SARGFTVIDT IKSAVEKACP 
GVVSCADILA IAARDSVVQP GGPNWNVKVG RRDAKTASQA AANSNIPAPS MSLSQLISSF SAVGLSTRDM VALSGAHTTE QSRC 

Retrieve as FASTA  
Remarks Partial sequence from 1 EST and 1 GSS (exon 1 and 2), 3' end is missing.