Entry information : BrPrx50-1Aa_other (Bra011771)
Entry ID 3042
Creation 2009-08-07 (Christophe Dunand)
Last sequence changes 2009-08-07 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-07-24 (Christophe Dunand)
Peroxidase information: BrPrx50-1Aa_other (Bra011771)
Name (synonym) BrPrx50-1Aa_other (Bra011771)
Class Class III peroxidase    [Orthogroup: Prx011]
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Brassica
Organism Brassica rapa    [TaxId: 3711 ]
Cellular localisation N/D
Tissue type Roots
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BrPrx50-1Aa_other
start..stop
S start..stop
BnPrx50-1_other 668 0 1..326 1..326
BoPrx50_other 661 0 1..326 1..326
ThPrx51 602 0 20..326 22..328
TsPrx51 602 0 20..326 22..328
Literature and cross-references BrPrx50-1Aa_other (Bra011771)
Literature Ryu,S.H., Kang,J.S., Yang,K.A. and Lim,C.O. Expressed Sequence Tags of Chinese cabbage Roots, Unpublished (2004)
DNA ref. GenBank:   AC189204.2 (99661..100992)
EST ref. GenBank:   EX134786.1 [5' end]   EX131445.1 [3' end]
Cluster/Prediction ref. UniGene:   Bra.5155
Protein sequence: BrPrx50-1Aa_other (Bra011771)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   326 (304)
PWM (Da):   %s   35588.22 (33215.8)  
PI (pH):   %s   9.25 (9.07) Peptide Signal:   %s   cut: 23 range:23-326
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MAAKNLLLLF ISLFLTVNLV SAQLRSNFYA GSCPNVEKIV RDAVQKKVQQ TFTTIPATLR LYFHDCFVNG CDASVMIAST GNNKAEKDHP DNLSLAGDGF DTVIKAKQAL DAVANCRNKV  SCADILTIAT RDVVNLAGGP RYEVELGRLD GLSSTAASVE GKLPQPTDDV NKLTSLFAKN GLSLNEMIAL SGAHTLGFAH CTKVFNRIYS FNKTTQVDPT VNKAYVTELR ASCPRNIDPR 
VAINMDPTTP RQFDNVYYKN LQQGKGLFTS DQDLFTDRRS KPTVDLWANN ANLFNQAFVN SMIKLGRVGV KTGRNGNIRR DCGAFN 

Retrieve as FASTA  
Remarks Complete sequence from genomic (3 introns) and 13 ESTs.