Entry information : BrPrx30-1Ab_other (Bra031309)
Entry ID 3047
Creation 2009-08-06 (Christophe Dunand)
Last sequence changes 2009-08-06 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-07-23 (Christophe Dunand)
Peroxidase information: BrPrx30-1Ab_other (Bra031309)
Name (synonym) BrPrx30-1Ab_other (Bra031309)
Class Class III peroxidase    [Orthogroup: Prx008]
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Brassica
Organism Brassica rapa    [TaxId: 3711 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BrPrx30-1Ab_other
start..stop
S start..stop
CrubPrx66 616 0 1..326 1..326
BnPrx30_other 613 0 4..326 7..329
CagraPrx41 613 0 1..326 1..326
TsPrx30 612 0 15..326 17..328
Literature and cross-references BrPrx30-1Ab_other (Bra031309)
Literature Yang,T.J., Kwon,S.J., Kim,J.A, Kim,J.S., Lim,K.B., Jin,M., Park,J.Y., Lim,M.H., Kim,H.I., Choi,B.S., Seol,Y.J., Park,D.S., Hahn,J.H. and Park,B.S. End sequence of Brassica rapa BamHI (KBrB) BAC clone, Unpublished (2005)
DNA ref. GenBank:   DX011465
EST ref. GenBank:   EX108773.1 [5' end]   EX074263.1 [3' end]
Cluster/Prediction ref. UniGene:   Bra.24154
Protein sequence: BrPrx30-1Ab_other (Bra031309)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   326 (302)
PWM (Da):   %s   35409 (32808.8)  
PI (pH):   %s   9.43 (9.44) Peptide Signal:   %s   cut: 25 range:25-326
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MKLLHVMAAF AAMFLMGMFV SSDAQLQMNF YAKSCPKAEK IISDHIEKHI HNGPSLAAPL IRMHFHDCFV RGCDGSVLIN STSGNAEKDA PPNLTLRGFG FVERIKTILE AECPKTVSCA  DIIALTARDA VVATGGPWWS VPTGRRDGRI SNLTEASNNI PPPTSNLTTL QRLFANQGLN LKDLVLLSGA HTIGVSHCSS MNTRLYNFST TVKQDPALDS EYAANLKANK CKSLNDNTTI 
LEMDPGSRKS FDLSYYRLVL KRRGLFQSDS ALTTNSATLK MINDLVNGSE EKFYKAFAKS MEKMGRVKVK TGSAGVIRTV CSVAGS 

Retrieve as FASTA  
Remarks Complete sequence from genomic (3 introns) and 5 ESTs.