Entry information : BrPrx71-1Ab_other (Bra031933)
Entry ID 3050
Creation 2009-08-10 (Christophe Dunand)
Last sequence changes 2009-08-10 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-07-20 (Christophe Dunand)
Peroxidase information: BrPrx71-1Ab_other (Bra031933)
Name (synonym) BrPrx71-1Ab_other (Bra031933)
Class Class III peroxidase    [Orthogroup: Prx006]
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Brassica
Organism Brassica rapa    [TaxId: 3711 ]
Cellular localisation N/D
Tissue type Etiolated seedlings
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BrPrx71-1Ab_other
start..stop
S start..stop
BnPrx71-2_other 631 0 1..319 1..327
BnPrx71-1Ca_other 572 0 1..319 1..328
BrPrx71-1Aa_other 572 0 1..319 1..328
TsPrx71 570 0 1..319 1..327
Literature and cross-references BrPrx71-1Ab_other (Bra031933)
Literature Ryu,S.H., Kang,J.S., Kang,C.-h., Kim,C.Y., Choi,Y.J., Lee,S.-H.,
Bahk,J.D., Lee,S.Y., Cho,M.J. and Lim,C.O. Expressed Sequence Tags of Chinese Cabbage Etiolated Seedling cDNA, Unpublished (2001)
DNA ref. GenBank:   AC234762.1 (84104..82451)
EST ref. GenBank:   EX112550.1 [5' end]   EX027838.1 [3' end]
Cluster/Prediction ref. UniGene:   bra.2211
Protein sequence: BrPrx71-1Ab_other (Bra031933)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   319 (296)
PWM (Da):   %s   33790.14 (31316.8)  
PI (pH):   %s   8.49 (8.40) Peptide Signal:   %s   cut: 24 range:24-319
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MGLVRSVCLL VTFLSYVVIS VHGQATRVGF YSTTCPTAET IVRNAVTAGF NSNPRIAPGI LRMHFHDCFV LGCDGSILIS GANTEQTARS NVNLRGFDVI ENAKTQLEAA CPGVVSCADI  LALAARDSVV LTRGISWQVP TGRRDGRVSL ASNANNLPGA GDSVAVQQQK FSAVRLSTRE LVVLVGGHTI GQAGCGAFRN RLYNSTTGPA DTTIDPTLLA QLQTQCPQNG DASVRVDLDT 
GSGTTFDTSY YNNLSRGRGV LQSDQVLWSD PATRPIVQQL MSPRSTFNAE FARAMVRMSN IGVLTGANGE IRRVCSAIN 

Retrieve as FASTA  
Remarks Complete sequence from genomic (introns 2 and 3) and 9 ESTs. Cultivar="Jangwon", sub_species="pekinensis".