Entry information : BrPrx73-1Aa_other (Bra031832)
Entry ID 3051
Creation 2006-12-26 (Christophe Dunand)
Last sequence changes 2006-12-26 (Christophe Dunand)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2012-07-20 (Christophe Dunand)
Peroxidase information: BrPrx73-1Aa_other (Bra031832)
Name (synonym) BrPrx73-1Aa_other (Bra031832)
Class Class III peroxidase    [Orthogroup: Prx011]
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Brassica
Organism Brassica rapa    [TaxId: 3711 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BrPrx73-1Aa_other
start..stop
S start..stop
TsPrx73 612 0 1..329 1..329
BrPrx73-1Ab_other 593 0 1..329 1..329
BnPrx73-3_other 593 0 1..329 1..329
CrubPrx63 590 0 1..329 1..329
Literature and cross-references BrPrx73-1Aa_other (Bra031832)
Literature Viehoever,P., Holtgraewe,D. and Weisshaar,B. BAC end sequences of Brassica rapa, Unpublished
DNA ref. GenBank:   AC189258 (94507..95844)
EST ref. GenBank:   CX271440 [3' end]
Protein sequence: BrPrx73-1Aa_other (Bra031832)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   329 (304)
PWM (Da):   %s   35856.61 (33267.2)  
PI (pH):   %s   9.82 (9.92) Peptide Signal:   %s   cut: 26 range:26-329
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MARLGLVLAM ALCLTISVFP DTTTAQLNTN FYGKSCPNVE AIVRKIVQQK VKETFVTIPA TLRLFFHDCF VNGCDASVMI QSTPNNKAEK DHPDNVSLAG DGFDVVIKAK KALDAIPSCR  NKVSCADILA LATRDVVVAA EGPSYPVELG RRDGLESTAA SVHGNLPGPN DNVDKLNKLF AKNKLTQEDM IALSAAHTLG FAHCSKVFNR IYNFNRTHII DPTLNKGYAK DLRLACPKNV 
DPRIAINIDP ITPKKLDNIY FRNLQQGKGL FTSDQVLYTN RRSRPTVDSW AKNSAAFNAA FVKAMTKLGR VGVKTGHNGN IRRDCGAFN 

Retrieve as FASTA  
Remarks Complete sequence from genomic (3 introns), 1 EST (CX271440) and 2 GSS (CT024709,CW981521, last exon). Cultivar="Inbred line 'Chiifu'". Incorrect prediction from Phytozome (frame shift in the PS due to a missing "A" before NFY, confirmed by EST).