Entry information : BrPrx45-1Aa_other (Bra024102)
Entry ID 3052
Creation 2009-08-04 (Christophe Dunand)
Last sequence changes 2009-08-04 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-07-24 (Christophe Dunand)
Peroxidase information: BrPrx45-1Aa_other (Bra024102)
Name (synonym) BrPrx45-1Aa_other (Bra024102)
Class Class III peroxidase    [Orthogroup: Prx020]
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Brassica
Organism Brassica rapa    [TaxId: 3711 ]
Cellular localisation N/D
Tissue types Leaves
Roots
Seeds
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BrPrx45-1Aa_other
start..stop
S start..stop
BnPrx45-1_other 667 0 1..325 1..325
TsPrx45 631 0 1..325 3..327
BrPrx45-1Ab_other 625 0 1..325 1..324
BnPrx45-2_other 625 0 1..325 1..324
Literature and cross-references BrPrx45-1Aa_other (Bra024102)
Literature Town,C.D., Shetty,J., Scott,R., Koo,H., Trick,M. and Bancroft,I. BAC end sequence of Brassica rapa (Town et al.) Unpublished (2005)
DNA ref. GenBank:   DU118231
EST ref. GenBank:   EX131535.1 [5' end]   EX118031.1 [3' end]
Cluster/Prediction ref. UniGene:   Bra.28110
Protein sequence: BrPrx45-1Aa_other (Bra024102)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   325 (300)
PWM (Da):   %s   35889.16 (33100.7)  
PI (pH):   %s   10.01 (10.05) Peptide Signal:   %s   cut: 26 range:26-325
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MEKKTNQTIF SIFSLLLLFS SCVSAQLRTG FYQNSCPNVE SIVRNAVRQK FQQTFVTAPA TLRLFFHDCF VRGCDASILI ASPSEKDHPD DMSLAGDGFD TVVKAKQAVD RDPKCRNKVS  CADILALATR EVVVLTGGPS YPVELGRRDG RLSTKASVQN NLPQPGFNLN QLNAMFNRHG LSQTDMIALS GAHTLGFAHC GKFSNRIYNF SPRTRIDPSL NSGYALQLRQ MCPQRVDPRI 
AINMDPTTPR TFDNAYFKNL QQGKGLFTSD QVLFTDQRSR ATVNSFANSE TAFRQAFVSA ITKLGRVGVK TGNAGEIRRD CSRFN 

Retrieve as FASTA  
Remarks Complete sequence from genomic (3 introns), 6 ESTs and 1 GSS.