Entry information : BrPrx49-1Aa_other (Bra011683)
Entry ID 3053
Creation 2006-12-26 (Christophe Dunand)
Last sequence changes 2006-12-26 (Christophe Dunand)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2012-07-23 (Christophe Dunand)
Peroxidase information: BrPrx49-1Aa_other (Bra011683)
Name (synonym) BrPrx49-1Aa_other (Bra011683)
Class Class III peroxidase    [Orthogroup: Prx001]
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Brassica
Organism Brassica rapa    [TaxId: 3711 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BrPrx49-1Aa_other
start..stop
S start..stop
BrPrx49-2Aa_other 653 0 6..338 2..331
BoPrx49-1Cb_other 612 0 19..338 15..330
AalpPrx09 608 0 6..338 2..331
BrPrx49-1Ab_other 600 0 6..338 2..331
Literature and cross-references BrPrx49-1Aa_other (Bra011683)
Literature Town,C.D., Shetty,J., Scott,R., Koo,H., Trick,M. and Bancroft,I. BAC end sequence of Brassica rapa (Town et al.), Unpublished (2005)
DNA ref. GenBank:   AC189373.2 (75283..76537)
Protein sequence: BrPrx49-1Aa_other (Bra011683)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   338
PWM (Da):   %s   37001.42 Transmb domain:   %s   i7-29o
PI (pH):   %s   8.63
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MSNIKARLVS FLFVLSLLCG FPLYYYYIQS QSNGGKLNPG FYAHSCPQAG EIVRSVVAQA VARETRMAAS LMRLHFHDCF VQGCDGSLLL DSSGRIVSEK SSNPNSKSAR GFEVVDQIKA  QLEKQCPGTV SCADILTLAA RDSSVLTGGP SWMVPLGRRD SRSASLSGSN NNIPAPNNTF QTILSKFNRQ GLDVTDLVAL SGSHTIGFSR CTSFRQRLYN QSGNGRPDMT LEQSFAANLR 
QRCPRSGGDQ NLSVLDIVSA AKFDNSYFKN LIENMGLLNS DQVLFSSNDK SRDLVKKYAE DQEEFFEQFA ESMIKMGNIS PLTGSSGEIR KDCRKINS 

Retrieve as FASTA  
Remarks Complete sequence from genomic (3 introns). Cultivar="Chiifu". Tandem duplicated of BrPrx49-2Aa. Incorrect prediction from Phytozome: Intron on the PS.