Entry information : BrPrx56-1Ab_other (Bra008715)
Entry ID 3055
Creation 2006-05-15 (Christophe Dunand)
Last sequence changes 2012-07-25 (Christophe Dunand)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2012-08-13 (Qiang Li)
Peroxidase information: BrPrx56-1Ab_other (Bra008715)
Name (synonym) BrPrx56-1Ab_other (Bra008715)
Class Class III peroxidase    [Orthogroup: Prx044]
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Brassica
Organism Brassica rapa    [TaxId: 3711 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BrPrx56-1Ab_other
start..stop
S start..stop
BnPrx56-2_other 677 0 1..329 1..329
AtPrx56 589 0 1..329 1..329
TsPrx56 582 0 1..329 1..329
BstrPrx35 581 0 1..329 1..329
Literature and cross-references BrPrx56-1Ab_other (Bra008715)
Literature Yang,T.J., Kwon,S.J., Kim,J.A, Kim,J.S., Lim,K.B., Jin,M., Park ,J.Y., Lim, M.H., Kim,H.I., Choi,B.S., Seol,Y.J., Park,D.S., Hahn ,J.H. and Park,B.S. End sequence of Brassica rapa BamHI (KBrB) BAC clone, Unpublished (2005).
DNA ref. GenBank:   DX052406
Protein sequence: BrPrx56-1Ab_other (Bra008715)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   330 (300)
PWM (Da):   %s   36157.64 (32869.9) Transmb domain:   %s   i7-29o
PI (pH):   %s   9.1 (9.24) Peptide Signal:   %s   cut: 30 range:30-329
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MAALQMNISC LIFLQVLLLL LSLFAQTNAQ GLKVGFYDNT CPKAEGIVKK SVLDAIKKDR TIGAPLLRMF FHDCFVRGCE GSVLLELKNK KDEKNAPPNL SLRGFEIIDN VKEAVEKECP  GVVSCSDVLA LVARDAVVAL NGPSWGVETG RRDGRVTNIN EARANLPSPF DNITSLITQF RSKGLDKKDL VVLSGGHTVG NGHCPLITNR LYNFTGKGDS DPNLDTEYAA NLRGRCKPTD 
TTTALEMDPG SFKTFDESYF KLVSQRRGFF QSDAALLDNQ ETKSYVLKQT KSYGSTFFKD FGVSMVKMGR IGVLTGRAGE VRKKCRMVN* 

Retrieve as FASTA  
Remarks Complete sequence from genomic (3 introns). Incorrect prediction from Phytozome: two extra exons between 'VALS' and 'HTIG'.