Entry information : BrPrx34-1Aa_other (Bra018006)
Entry ID 3056
Creation 2007-01-12 (Christophe Dunand)
Last sequence changes 2007-01-12 (Christophe Dunand)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2012-07-20 (Christophe Dunand)
Peroxidase information: BrPrx34-1Aa_other (Bra018006)
Name (synonym) BrPrx34-1Aa_other (Bra018006)
Class Class III peroxidase    [Orthogroup: Prx035]
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Brassica
Organism Brassica rapa    [TaxId: 3711 ]
Cellular localisation N/D
Tissue type Cell culture
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BrPrx34-1Aa_other
start..stop
S start..stop
BnPrx34_other 671 0 1..354 1..354
BrPrx34-1Ab_other 644 0 8..354 3..349
AtPrx34 637 0 13..354 12..353
AlyPrx34-1 636 0 16..354 15..353
Literature and cross-references BrPrx34-1Aa_other (Bra018006)
Literature Gao,R.J., Dai,D.P. and Ma,R.C. Expressed sequence tags of heading leaf during the heading process of Chinese cabbage, Unpublished (2003
DNA ref. GenBank:   AC189357 (108655..111224)
EST ref. GenBank:   CA992157
Protein sequence: BrPrx34-1Aa_other (Bra018006)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   354 (323)
PWM (Da):   %s   38905.67 (35517.0) Transmb domain:   %s   i7-29o
PI (pH):   %s   6.5 (6.27) Peptide Signal:   %s   cut: 32 range:32-354
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MHSSYSFSTS STWIILITLA CIVFRASLSD AQLTPTFYDT SCPNVTNIVR ATIVNELRSD PRIAASILRL HFHDCFVNGC DASILLDNTT SFRTEKDAIG NANSARGFPV IDTMKAAVER  ACPRTVSCAD MLTIAAQQSV TLAGGPSWRV PLGRRDSLQA FFNLSNVNLP SPFATLPELK DRFRNVGLDR PSDLVALSGG HTFGKNQCQF IIRRLYNFSN TGLPDPTLNT TYLQTLRGLC 
PLNGNLSALV DFDLRTPTVF DNKYYVNLKE QKGLIQTDQE LFSSPNATDT IPLVREYADG TQKFFDAFVE AMNRMGNITP LTGTQGEIRL NCKVVNSNSL LQDVVELVDF VSSI 

Retrieve as FASTA  
Remarks Complete sequence from genomic (3 introns) and 3 ESTs (CA992157, AT000790). Tandem duplication with BrPrx33-1. Cultivar="Inbred line 'Chiifu'".