Entry information : BrPrx34-1Ab_other (Bra029933)
Entry ID 3057
Creation 2009-08-04 (Christophe Dunand)
Last sequence changes 2009-08-04 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-07-20 (Christophe Dunand)
Peroxidase information: BrPrx34-1Ab_other (Bra029933)
Name (synonym) BrPrx34-1Ab_other (Bra029933)
Class Class III peroxidase    [Orthogroup: Prx035]
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Brassica
Organism Brassica rapa    [TaxId: 3711 ]
Cellular localisation N/D
Tissue type Seedlings
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BrPrx34-1Ab_other
start..stop
S start..stop
AtPrx34 665 0 8..349 12..353
TsPrx34 659 0 10..349 16..355
BstrPrx03 658 0 2..349 6..353
AlyPrx33 657 0 7..349 7..349
Literature and cross-references BrPrx34-1Ab_other (Bra029933)
Literature Kang,J.S., Ryu,S.H., Yang,K.A. and Lim,C.O. Expressed Sequence Tags of NaCl treated Chinese cabbage seedlings, Unpublished (2004)
EST ref. GenBank:   EX034274.1 [5' end]   EX030132.1 [3' end]
Cluster/Prediction ref. UniGene:   Bra.1117
Protein sequence: BrPrx34-1Ab_other (Bra029933)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   349 (323)
PWM (Da):   %s   38330.42 (35501.0)  
PI (pH):   %s   7.94 (7.99) Peptide Signal:   %s   cut: 27 range:27-349
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MHSTLSTWTI LITLACLMLR ASLSDAQLTP TFYDSSCPNV TNIVRETIVN ELRSDPRIAA SILRLHFHDC FVNGCDASIL LDNTTSFRTE KDAAGNANSA RGFPVIDRMK AAVERACPRT  VSCADMLTIA AQQSVTLAGG PSWRVPLGRR DSLQAFLNLA NANLPAPFFT LPQLKASFRK VGLDRPSDLV ALSGGHTFGK NQCRFIMDRL YNFSNTGLPD PTLNTTYLQT LRGLCPRTGN 
LSALVDFDVR TPTVFDNKYY VNLREQKGLI QSDQELFSSP NATDTIPLVR AYADGTQTFF NAFVEAMNRM GNITPLTGTQ GQIRLNCRVV NSNFLLHDIV DIVDFVSSM 

Retrieve as FASTA  
Remarks Complete sequence from 38 ESTs