Entry information : RsoCP01_GMI1000
Entry ID 3065
Creation 2006-08-24 (Christophe Dunand)
Last sequence changes 2006-08-24 (Christophe Dunand)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2013-08-14 (Christophe Dunand)
Peroxidase information: RsoCP01_GMI1000
Name RsoCP01_GMI1000
Class Catalase peroxidase    [Orthogroup: CP001]
Taxonomy Bacteria Proteobacteria Betaproteobacteria Burkholderiaceae Ralstonia
Organism Ralstonia solanacearum    [TaxId: 305 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value RsoCP01_GMI1000
start..stop
S start..stop
LnCP01 1283 0 1..724 1..726
BthCP01_E264 1276 0 1..724 1..728
BokCP01 1269 0 1..724 1..728
BmCP01_23344 1268 0 1..724 1..728
Literature and cross-references RsoCP01_GMI1000
Literature Salanoubat,M., Genin,S., Artiguenave,F., Gouzy,J., Mangenot,S., Arlat,M., Billault,A., Brottier,P., Camus,J.C., Cattolico,L.,Chandler,M., Choisne,N., Claudel-Renard,C., Cunnac,S., Demange,N.,Gaspin,C., Lavie,M., Moisan,A., Robert,C., Saurin,W., Schiex,T., Siguier,P., Thebault,P., Whalen,M., Wincker,P., Levy,M., Weissenbach,J. and Boucher,C.A. Genome sequence of the plant pathogen Ralstonia solanacearum, Nature 415 (6871), 497-502 (2002)
Protein ref. UniProtKB:   Q8Y1B4
DNA ref. GenBank:   NC_003295.1 (821257..819890) [Sequencing error]
Protein sequence: RsoCP01_GMI1000
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   724
PWM (Da):   %s   79157.49  
PI (pH):   %s   5.53
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MTTESKCPFK HAAAGGGVSN RDWWPNQLNL KVLHQHSSKS DPMDTDFDYA QAFKRLDLAA VKQDLLALMT TSQDWWPADF GHYGPLFIRM AWHSAGTYRT GDGRGGAGAG QQRFAPLNSW  PDNANLDKAR RLLWPIKQKY GRNISWADLM ILTGNVALES MGFKTFGFAG GRKDVWEPEE DVYWGSETTW LGDQRYTGDR DLENPLAAVQ MGLIYVNPEG PNGNPDPIAA ARDIRETFAR  MAMNDEETVA LIAGGHSFGK THGAGPASNV GPEPEAAGIE EQGLGWSSRF GTGKGTDAIT SGLEVTWTTT PTQWSNNFFQ NLFGYEWELT KSPAGAHQWV AKDAAETIPD AHDPSAKHLP  TMLTTDLSLR FDPAYEKISR RFYEHPEQFA DAFARAWFKL THRDMGPRAR YLGPEVPAEA LIWQDPIPAV DHKLIDTQDI AALKARILAS GLSVSQLVST AWASASTFRG SDMRGGANGA  RIRLAPQKDW EANQPAQLAK VLETLESIQG AFNGAQSGGK KVSLADLIVL AGCAGVEQAA KNAGHAVEVP FTPGRMDAAQ AQTDVESFAV LEPIADGFRN YQKGKYTLPA EALLVDKAQL  LTLTAPEMTV LVGGLRVLDT NIGQTRHGVF TQRPESLTND FFVNLLDMGT EWKATDGRDV FEGRDRATGA LKWTGTRVDL VFGSHSQLRA LAEVYGSADA QAKFVRDFVA AWDKVMNLDR 
FDLA 

Retrieve as FASTA  
Remarks Complete sequence from genomic. Sequencing error, which creates two truncated peroxidases. If one "t" or one "c" is added in the sequence between HGAGPA and SNVGPE (reverse strand: tccggctccaac --> tccggcC/Tccaac), then the frameshift is repaired. Strain="GMI1000".