Entry information : BrPrx29-1Aa_other (Bra022195 )
Entry ID 3066
Creation 2007-01-12 (Christophe Dunand)
Last sequence changes 2007-01-12 (Christophe Dunand)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2012-07-24 (Christophe Dunand)
Peroxidase information: BrPrx29-1Aa_other (Bra022195 )
Name (synonym) BrPrx29-1Aa_other (Bra022195 )
Class Class III peroxidase    [Orthogroup: Prx039]
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Brassica
Organism Brassica rapa    [TaxId: 3711 ]
Cellular localisation N/D
Tissue types Flowers
Leaves
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BrPrx29-1Aa_other
start..stop
S start..stop
TsPrx29 630 0 1..336 1..339
AhalPrx23 620 0 1..337 1..339
AlyPrx29 615 0 1..337 1..339
BstrPrx17 609 0 1..337 1..339
Literature and cross-references BrPrx29-1Aa_other (Bra022195 )
Literature Yang,T.J., Kwon,S.J., Kim,J.A, Kim,J.S., Lim,K.B., Jin,M., Park,J.Y., Lim,M.H., Kim,H.I., Choi,B.S., Seol,Y.J., Park,D.S., Hahn ,J.H. and Park,B.S. End sequence of Brassica rapa BamHI (KBrB) BAC clone, Unpublished (2005)
DNA ref. GenBank:   AC189348 (49012..51070)
EST ref. GenBank:   EX127991.1 [5' end]   GR725496.1 [3' end]
Protein sequence: BrPrx29-1Aa_other (Bra022195 )
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   337 (311)
PWM (Da):   %s   36479.07 (33823.7)  
PI (pH):   %s   4.51 (4.40) Peptide Signal:   %s   cut: 27 range:27-337
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MKPKSIAAAF ASCFLIISLL CSCISGDQNE TNYEGLSYNY YEKTCPRLEE IVRSSISPMF ALDPTAPAAL LRLMFHDCQV QGCDASILIE PSGDQQFTEL DSAKNFGIRK RELIGSIKTS  LEVECPQQVS CSDLIILAAR EAVALTGGPL IAVPLGRKDS LSTPSKHVAD SELPPSTADV DSILNLFAGI DMTIEESVAI MGSHSIGVTH CNNVLSRFDN ENATSANMDP RFQTFLRVVC 
PEFSPTSKTA EATFVPNDQT SLIFDTAYYD DSIAGRGNLR IDSEIGVDPR TRPFVEAFAA DQDRFFNAFS SAFVKLSSYK VLTGNNGVVR SVCDKVD 

Retrieve as FASTA  
Remarks Complete sequence from genomic DNA (introns 1 and 3)(GSS and full genome) and 4 ESTs. Cultivar="Inbred line 'Chiifu'".