Entry information : BrPrx47-1Ab_other (Bra034561)
Entry ID 3069
Creation 2009-08-06 (Christophe Dunand)
Last sequence changes 2012-07-24 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-07-24 (Christophe Dunand)
Peroxidase information: BrPrx47-1Ab_other (Bra034561)
Name (synonym) BrPrx47-1Ab_other (Bra034561)
Class Class III peroxidase    [Orthogroup: Prx026]
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Brassica
Organism Brassica rapa    [TaxId: 3711 ]
Cellular localisation N/D
Tissue type Leaves
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BrPrx47-1Ab_other
start..stop
S start..stop
TsPrx47 551 0 1..319 8..326
AlyPrx47 550 0 3..319 9..325
AtPrx47 548 0 3..319 9..325
AruPrx47 542 0 6..319 1..314
Literature and cross-references BrPrx47-1Ab_other (Bra034561)
Literature Gao,R.J., Dai,D.P. and Ma,R.C. Expressed sequence tags of heading leaf during the heading process of Chinese cabbage, Unpublished (2003)
DNA ref. GenBank:   AJ855779 [5' end]
EST ref. GenBank:   EX114527.1 [Fragment]
Cluster/Prediction ref. UniGene:   Bra.3759
Protein sequence: BrPrx47-1Ab_other (Bra034561)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   320 (296)
PWM (Da):   %s   34890.27 (32290.0) Transmb domain:   %s   o6-28i
PI (pH):   %s   8.14 (8.31) Peptide Signal:   %s   cut: 24 range:24-319
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MGDNMMVMAN LLSVIMLMHA IVALSSNVRG LSKNYYMKSC PTAEQIVKNS VNNALQADPT LAAGLIRMLF HDCFIEGCDA SILLDSTNDN TAEKDSPGNL SLRGYEIIYD TKQEIENTCP  GVVSCADILA MAARDAVFWA GGPFYQIPKG RFDGKRSKIE DTKNLLPPSF NASQLIQAFG QRGFSPKDVV ALSGAHTLGV ARCSSFKARL ITLDSSVDSS FANTLSKTCS AGDNAEQPLD 
ATRNDFDNAY FNALQMKSGV LFSDQALFNS PVTRNLVNGY ALNQTKFFFD FQKAMRKMSK LNVKNSSQGE VRKHCRCLN* 

Retrieve as FASTA  
Remarks Complete sequence from genomic (3 introns) and 3 ESTs. Brassica rapa subsp. pekinensis. Incorrect prediction from Phytozome: short PS is missing.