Entry information : BrPrx31-1Ab_other ( Bra039059)
Entry ID 3076
Creation 2008-11-13 (Christophe Dunand)
Last sequence changes 2008-11-13 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-07-23 (Christophe Dunand)
Peroxidase information: BrPrx31-1Ab_other ( Bra039059)
Name (synonym) BrPrx31-1Ab_other ( Bra039059)
Class Class III peroxidase    [Orthogroup: Prx002]
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Brassica
Organism Brassica rapa    [TaxId: 3711 ]
Cellular localisation N/D
Tissue types Callus
Roots
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BrPrx31-1Ab_other
start..stop
S start..stop
ThPrx31 569 0 1..326 1..323
TsPrx31 569 0 1..326 1..323
BstrPrx60 563 0 26..326 16..316
AlyPrx31 561 0 26..326 16..316
Literature and cross-references BrPrx31-1Ab_other ( Bra039059)
Literature Ryu,S.H., Yang,K.A., Lee,S.Y., Kim,H.-I., Cho,M.J. and Lim,C.O. Expressed Sequence Tags of Chinese Cabbage Etiolated Seedling cDNA, Unpublished (2002)
DNA ref. GenBank:   AC232591.1 (43288..42308)
Cluster/Prediction ref. UniGene:   Bra.18104   Bra.3345 [5' end]
Protein sequence: BrPrx31-1Ab_other ( Bra039059)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   326 (297)
PWM (Da):   %s   35886.44 (32821.7)  
PI (pH):   %s   8.88 (9.06) Peptide Signal:   %s   cut: 30 range:30-326
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MGEQSPLKPL SSLSLLLLLL TLLTTTVDSR LTTDFYSKSC PRFLDIVRDT ISDKQITHPT TAAAVIRLFF HDCFPNGCDA SILVSSTAFN VAERDSSINL SLPGDGFDVI VRAKTALELA  CPQTVSCSDI ISVATRDLLV TVGGPYYPVH LGRRDSRTSK ASLLADLLPL PSSPMAKTIR QFESRGFTVQ EMVALSGAHS IGFSHCKEFV GLVGRNSTGY NPRFAQALKK ACSSYPKDPT 
ISVFNDIMTP NKFDNMYFQN IPKGLGLLES DHGLYSDPRT RPFVDLYARD QDRFFKDFAK AMQKLSLYGV KTGRRGEIRR RCDAIN 

Retrieve as FASTA  
Remarks Complete sequence from genomic (no intron) and 6 ESTs .