Entry information : BrPrx44-2Ab_other (Bra019132)
Entry ID 3077
Creation 2007-01-12 (Christophe Dunand)
Last sequence changes 2007-01-12 (Christophe Dunand)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2012-07-24 (Christophe Dunand)
Peroxidase information: BrPrx44-2Ab_other (Bra019132)
Name (synonym) BrPrx44-2Ab_other (Bra019132)
Class Class III peroxidase    [Orthogroup: Prx019]
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Brassica
Organism Brassica rapa    [TaxId: 3711 ]
Cellular localisation N/D
Tissue type Roots
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BrPrx44-2Ab_other
start..stop
S start..stop
TsPrx44 590 0 1..312 1..312
CrubPrx117 590 0 1..312 1..312
CrubPrx65 588 0 1..312 1..312
CagraPrx21 583 0 1..312 1..312
Literature and cross-references BrPrx44-2Ab_other (Bra019132)
Literature Ryu,S.H., Kang,J.S., Yang,K.A. and Lim,C.O. Expressed Sequence Tags of Chinese cabbage Roots, Unpublished (2004)
DNA ref. GenBank:   AC189360.2 (53910..52510)
EST ref. GenBank:   CV432976
Protein sequence: BrPrx44-2Ab_other (Bra019132)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   312 (292)
PWM (Da):   %s   34124.46 (31896.3) Transmb domain:   %s   i5-27o
PI (pH):   %s   11.17 (11.18) Peptide Signal:   %s   cut: 21 range:21-312
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MRSITALFFL FCFLVPSALA QLRFGFYGRS CPRAESIVAN VVANRFRRDR SITAALLRMQ FHDCFVRGCD ASLLIDPRPG RPSEKSTGPN ASVRGYEIID EAKRQLEAAC PRTVSCADIV  TLATRDSVAL AGGPRFSVPT GRRDGLRSSP NDVNLPGPTI PVSASIQAFA AKGMNANDMV TLIGGGHSVG SIHCSLFQDR LNDPAMDRTL NARLRNTCRS PNDPSVFLDQ RTPFIVDNAI 
YGEIRRQRGV MRIDQNMGLD RSTRGIVSSF AQSNALFRKR FAEAMVKMGR IGVLTGRSGE IRRNCRVFNN GR 

Retrieve as FASTA  
Remarks Complete sequence from genomic (introns 1 and 3') and 1 partial EST (Short 3' end). Cultivar="Inbred line Chiifu".