Entry information : BrPrx48-1Aa_other (Bra011475)
Entry ID 3079
Creation 2010-03-04 (Christophe Dunand)
Last sequence changes 2010-03-04 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-07-24 (Christophe Dunand)
Peroxidase information: BrPrx48-1Aa_other (Bra011475)
Name (synonym) BrPrx48-1Aa_other (Bra011475)
Class Class III peroxidase    [Orthogroup: Prx022]
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Brassica
Organism Brassica rapa    [TaxId: 3711 ]
Cellular localisation N/D
Tissue types Flower buds
Flowers
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BrPrx48-1Aa_other
start..stop
S start..stop
BnPrx48-1_other 765 0 1..401 1..400
TsPrx48-2 608 0 2..400 1..413
AtPrx48 556 0 5..400 11..403
AhalPrx36 554 0 5..400 11..404
Literature and cross-references BrPrx48-1Aa_other (Bra011475)
Literature Town,C.D., Shetty,J., Scott,R., Koo,H., Trick,M. and Bancroft,I. BAC end sequence of Brassica rapa (Town et al.), Unpublished (2005)
DNA ref. GenBank:   AC189386 (102001..103490)
EST ref. GenBank:   EX115478.1 [3' end]
Protein sequence: BrPrx48-1Aa_other (Bra011475)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   401 (381)
PWM (Da):   %s   44303.69 (41979.5) Transmb domain:   %s   i5-22o
PI (pH):   %s   4.76 (4.64) Peptide Signal:   %s   cut: 21 range:21-401
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MMRFIITCLV IALSVYVAYH GLEYDHGFIR LTTRSPGNRT GVKAPEKSPF DDNDDLMTWY MEDDSDHQSY SLHYDFYQDS CPTAERIITI GIREVYAAKP SVAPSLIRLL FHDCFIEGCD  ASVLLDADES LTSEKEASPN QSLKGFDVIE WIKSELEKVC PGVVSCADVL VLAAREAVLM AGGPFYPLET GRRDSVVAFK EIAERELPSP QASISVILAR FGTRGFNERE TVSLFGAHSI  GITHCTFFED RLYNFSGTGK PDPELDTGFQ QELKTNCPYS ALAPSPSTGV GPSIPASDYG GVSSAGGSDG VVDLSYNNEG GEMNFGTRYY RRLMQKKGLM YADQQLTGRE ETEMWVRAYA 
SDTQLFRRDF AMSMMKLSNY HVLTGPLGQV RTTCSKVLPK I 

Retrieve as FASTA  
Remarks Complete sequence from genomic (3 introns) and 1 EST. Cultivar="Inbred line 'Chiifu'".