Entry information : BrPrx49-2Aa_other (Bra011681)
Entry ID 3080
Creation 2006-12-26 (Christophe Dunand)
Last sequence changes 2006-12-26 (Christophe Dunand)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2012-07-23 (Christophe Dunand)
Peroxidase information: BrPrx49-2Aa_other (Bra011681)
Name (synonym) BrPrx49-2Aa_other (Bra011681)
Class Class III peroxidase    [Orthogroup: Prx001]
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Brassica
Organism Brassica rapa    [TaxId: 3711 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BrPrx49-2Aa_other
start..stop
S start..stop
BrPrx49-1Aa_other 653 0 2..331 6..338
BoPrx49-1Cb_other 635 0 15..331 15..330
AalpPrx09 628 0 1..331 1..331
BrPrx49-1Ab_other 610 0 1..331 1..331
Literature and cross-references BrPrx49-2Aa_other (Bra011681)
Literature Town,C.D., Shetty,J., Scott,R., Koo,H., Trick,M. and Bancroft,I. BAC end sequence of Brassica rapa (Town et al.),Unpublished (2005)
DNA ref. GenBank:   AC189373.2 (81166..82396)
Cluster/Prediction ref. UniGene:   Bra.18447
Protein sequence: BrPrx49-2Aa_other (Bra011681)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   331 (309)
PWM (Da):   %s   36146.99 (33664.6)  
PI (pH):   %s   8.41 (8.39) Peptide Signal:   %s   cut: 23 range:23-331
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MARLSSFLFV LSLLCVLPIY LCQQSYGGKL NPGYYAHSCP QAGEIVRSVV AQAVARETRM AASLMRLHFH DCFVQGCDGS LLLDSSGRIV SEKSSNPNSK SARGFEVVDQ IKAQLEKQCP  GTVSCADILT LAARDSSVLT GGPSWMVPLG RRDSRSASLS GSNNNIPAPN NTFQTILSKF NRQGLDVTDL VALSGSHTIG FSRCTSFRQR LYNQSGNGRP DMTLEQSFAA NLRQRCPRSG 
GDQNLSVLDI VSAAKFDNSY FKNLIENMGL LNSDQVLFSS NDKSRDLVKK YAEDQEEFFE QFAESMIKMG NISPLTGSSG EIRKDCRKIN S 

Retrieve as FASTA  
Remarks Complete sequence from genomic (3 introns) and 11 ESTs. Cultivar="Inbred line Chiifu", sub_species="pekinensis". Tandem duplicated of BrPrx49-1Aa.