Entry information : PtPrx[P]12
Entry ID 3089
Creation 2008-08-18 (Christophe Dunand)
Last sequence changes 2008-08-18 (Christophe Dunand)
Sequence status theoretical translation / pseudogene
Reviewer Not yet reviewed
Last annotation changes 2010-06-30 (Christophe Dunand)
Peroxidase information: PtPrx[P]12
Name PtPrx[P]12
Class Class III peroxidase     [Orthogroup: Prx036]*
Taxonomy Eukaryota Viridiplantae Streptophyta Salicaceae Populus
Organism Populus trichocarpa (Western balsam poplar)    [TaxId: 3694 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PtPrx[P]12
start..stop
S start..stop
MePrx90 444 2e-158 12..305 18..323
RcPrx67 437 9e-156 13..304 19..322
PpePrx62 434 8e-155 11..305 16..324
CroPrx34 418 2e-148 12..305 12..317
Literature and cross-references PtPrx[P]12
DNA ref. Phytozome 12:   scaffold_12 (13739943..13738754)
Protein sequence: PtPrx[P]12
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   305
PWM (Da):   %s   32848.36  
PI (pH):   %s   8.16
Sequence
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Send to Peroxiscan
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NAVVYLKANC CLILISPSKA ALDSHHHDQT CQQAEKIVLE TVLNASMHDP KVPARILRMF FHECFVGCDA SILLDSTPGN QAEKDGPPNV SVRSFYVNDD AKAKLEMACP RAVSCADIIA  MAGRDQSVGP SWNVLTGRKD GRVSKANDTI NLPAPIKLQC NYTANSKLCG LGVKDLVALS GGHTLGFSDC SSFEASSTSK LxFMNPSMNT QFAKNLKKKC PKPNKDDNAG EFLDSTSSTF 
DNDYYKRVIE GKGVFGADQx TRWIVESFAR DQSLFFRGFA ASMVKLGNVG VIENGEVRLK CRVVH 

Retrieve as FASTA  
Remarks Partial sequence from genomic (chromo 12). Ps is missing and several frameshift and one stop.
DNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
AACGCCGTTG TATATCTTAA AGCCAATTGT TGCTTAATCT TGATCTCACC TTCAAAAGCT GCGCTTGATT CTCATCACCA TGATCAAACA TGTCAACAAG CAGAGAAAAT AGTTTTAGAG  ACAGTTCTTA ATGCTTCCAT GCATGATCCT AAAGTCCCTG CAGCTAGCTC GTATCCTTAG GATGTTCTTC CATGAGTGCT TCGTAAGGGT ATGTAATTCC TCTCTTGGCA CATGTAAACA  AATGCATGAT AGTAGTCTTT ACACCGAGTA GCCAATGTAG AAAACAGTAC ATAGTATATG ATCTTACTGG AATACTTCTT GATACAGGGA TGTGATGCAT CGATTTTGCT GGATTCTACT  CCTGGAAACC AAGCAGAGAA AGATGGCCCT CCCAATGTCT GATCAGTTCG ATCATTCTAC GTTAATGATG ATGCCAAAGC TAAGCTTGAG ATGGCTTGTC CACGCGCGGT TTCATGTGCT  GATATCATAG CCATGGCAGG GAGAGATATG TAGTAGCCAT GGTAAAAAGA AAACAAACGC TTCCAACACT TTCTTACATG CATGTCCATA CATATATGAT TAAATGGAAA AATATTGTTT  AGTTTTCTTC TAATATCATC TCACTTGTGA TGTTTTCATC AGTCTGTAGG ACCTTCTTGG AATGTGCTGA CAGGAAGGAA AGATGGAAGG GTGTCAAAAG CTAATGATAC AATCAACGTC  CTACCAGCTC CAAACTTCAA TGTAATTACA CAGCTAATTC AAAGCTCTGT CTAGAGAGGT CTAGGAGTCA AAGACTTGGT AGCTTTATCA GGAGGCCATA CTTTAGGATT CTCAGATTGC  TCTTCTTTTG AAGCTAGCTC GACTTCAAAA CTTTAGTTCA GTTCATGAAT CCAAGCATGA ATACTCAGTT CGCCAAGAAT CTAAAGAAGA AATGCCCTAA ACCAAACAAG GATGATAATG  CAGGAGAATT CCTAGACTAG CTCGACCTCA TCAACTTTCG ATAATGATTA TTACAAGAGA GTTATAGAAG GAAAAGGTGT CTTCGGAGCA GATCAACAAG ATGGATTGTT GAATCATTTG 
CCAGGGATCA AAGTTTGTTC TTCAGAGGAT TTGCAGCGTC AATGGTAAAA CTTGGAAATG TCGGGGTGAT TGAAAACGGA GAAGTGAGAC TTCAGTGCCG AGTGGTCCAT 

Retrieve as FASTA