Entry information : BrPrx72-1Aa_other ( Bra037176 )
Entry ID 3096
Creation 2007-01-12 (Christophe Dunand)
Last sequence changes 2007-01-12 (Christophe Dunand)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2012-07-20 (Christophe Dunand)
Peroxidase information: BrPrx72-1Aa_other ( Bra037176 )
Name (synonym) BrPrx72-1Aa_other ( Bra037176 )
Class Class III peroxidase    [Orthogroup: Prx001]
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Brassica
Organism Brassica rapa    [TaxId: 3711 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BrPrx72-1Aa_other
start..stop
S start..stop
TsPrx72 664 0 1..337 1..336
ThPrx72 662 0 1..337 1..336
BrPrx72-1Ab_other 662 0 1..336 1..335
AhalPrx01 658 0 1..337 1..336
Literature and cross-references BrPrx72-1Aa_other ( Bra037176 )
Literature Bancroft,I., Huckle,E.J., Trick,M. and Beckett,P. BAC end sequence of Brassica rapa, Unpublished
DNA ref. GenBank:   AC189225 (45394..46919)
Protein sequence: BrPrx72-1Aa_other ( Bra037176 )
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   337 (313)
PWM (Da):   %s   37286.95 (34844.6) Transmb domain:   %s   i7-29o
PI (pH):   %s   8.97 (9.22) Peptide Signal:   %s   cut: 25 range:25-337
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MAASLNILIV AVVSLIAFSP LCLCSKAYGS GGYLFPQFYD HSCPKAQEIV QTIVAKAFAQ DPRMPASLLR LHFHDCFVKG CDASILLDNS GTIISEKRSN PNRNSARGFE LIEEIKRALE  QECPETVSCA DILALAARDS TVITGGPSWE VPLGRRDARG ASLSGSNNDI PAPNNTFQTI LTKFKRQGLN LVDLVSLSGS HTIGNSRCTS FRQRLYNQSG NGKPDLTLNQ YYASMLRKQC 
PRSGGDQNLF FLDFATPFKF DNHYFKNLIT YKGLLSSDEV LFTKNRESRE LVKLYAENQE AFFEQFAKSM VKMGNISPLT GGRGEIRRIC RRVNHAY 

Retrieve as FASTA  
Remarks Complete sequence from genomic (3 introns) and 2 GSS (AJ857275, AJ857282). Cultivar="Inbred line Chiifu". No EST.