Entry information : BrPrx66-1Aa_other (Bra022567)
Entry ID 3121
Creation 2009-08-11 (Christophe Dunand)
Last sequence changes 2009-08-11 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-07-23 (Christophe Dunand)
Peroxidase information: BrPrx66-1Aa_other (Bra022567)
Name (synonym) BrPrx66-1Aa_other (Bra022567)
Class Class III peroxidase    [Orthogroup: Prx034]
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Brassica
Organism Brassica rapa    [TaxId: 3711 ]
Cellular localisation N/D
Tissue types Buds
Roots
Whole plant
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BrPrx66-1Aa_other
start..stop
S start..stop
TsPrx66 631 0 1..322 1..322
AtPrx66 628 0 1..322 1..322
AlyPrx66 622 0 1..322 1..322
BstrPrx29 620 0 1..322 1..322
Literature and cross-references BrPrx66-1Aa_other (Bra022567)
Literature Viehoever,P., Holtgraewe,D. and Weisshaar,B. BAC end sequences of Brassica rapa, Unpublished
DNA ref. GenBank:   DU119043.1
EST ref. GenBank:   EX106545.1 [5' end]   EX075315.1 [3' end]
Cluster/Prediction ref. UniGene:   Bra.17595
Protein sequence: BrPrx66-1Aa_other (Bra022567)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   322 (298)
PWM (Da):   %s   35623.2 (32968.8)  
PI (pH):   %s   9.72 (9.49) Peptide Signal:   %s   cut: 25 range:25-322
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MAFSKRLVFA MIFAVFAIVK PSEAALDAHY YDRSCPVAEK IILETVKNAT LYDPKVPARL LRMFFHDCFI RGCDASILLD STMSTQAEKD GPPNISVRSF YVIEDAKRKL EKVCPRTVSC  ADVIAIAARD VVTLSGGPYW NVLKGRKDGT ISRANETINL PAPTFNVSQL IQSFAARGLS VKDMVTLSGG HTIGFSHCSS FEARLQNFSK FHDVDPSMNY AFAQSLKKKC PRSNNRGKNA 
GTVLDSTSSV FDNDYYKQIL SGKGVFGSDQ ALLGDYRTKW IVETFARDQK AFFREFATSM VKLGNFGVKE TGQVRVNSRF VN 

Retrieve as FASTA  
Remarks Complete sequence from genomic (introns 1 and 2), 10 ESTs and 3 GSS. Cultivar="Chiifu", sub_species="pekinensis".